Evidence map›Paper›PMID 28775251›Full record

ArticleScientific reports2017

Niche-specific gene expression in a parasitic nematode; increased expression of immunomodulators in Teladorsagia circumcincta larvae derived from host mucosa.

Tom N McNeilly, David Frew, Stewart T G Burgess, Harry Wright, David J Bartley, Yvonne Bartley, Alasdair J Nisbet

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 22 citations in OpenAlex.

  1. Article
  2. Article
  3. Modulation of the Immune Response by Nematode Derived Molecules.International journal of molecular sciences · 2025
    Review
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  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Tom N McNeillyMoredun Research Institute, Edinburgh, United Kingdom. Tom.McNeilly@moredun.ac.uk.ORCID 0000-0001-6469-0512
David FrewMoredun Research Institute, Edinburgh, United Kingdom.
Stewart T G BurgessMoredun Research Institute, Edinburgh, United Kingdom.
Harry WrightMoredun Research Institute, Edinburgh, United Kingdom.
David J BartleyMoredun Research Institute, Edinburgh, United Kingdom.
Yvonne BartleyMoredun Research Institute, Edinburgh, United Kingdom.
Alasdair J NisbetMoredun Research Institute, Edinburgh, United Kingdom. Alasdair.Nisbet@moredun.ac.uk.
Moredun Research Institute · GB

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Metazoan parasites have to survive in many different niches in order to complete their life-cycles. In the absence of reliable methods to manipulate parasite genomes and/or proteomes, identification of the molecules critical for parasite survival within these niches has largely depended on comparative transcriptomic and proteomic analyses of different developmental stages of the parasite; however, changes may reflect differences associated with transition between developmental stages rather than specific adaptations to a particular niche. In this study, we compared the transcriptome of two fourth-stage larval populations of the nematode parasite, Teladorsagia circumcincta, which were of the same developmental stage but differed in their location within the abomasum, being either mucosal-dwelling (MD) or lumen-dwelling (LD). Using RNAseq, we identified 57 transcripts which were significantly differentially expressed between MD and LD larvae. Of these transcripts, the majority (54/57) were up-regulated in MD larvae, one of which encoded for an ShKT-domain containing protein, Tck6, capable of modulating ovine T cell cytokine responses. Other differentially expressed transcripts included homologues of ASP-like proteins, proteases, or excretory-secretory proteins of unknown function. Our study demonstrates the utility of niche- rather than stage-specific analysis of parasite transcriptomes to identify parasite molecules of potential importance for survival within the host.

Indexed as

Gene ExpressionHost-Parasite InteractionsAmino Acid SequenceAnimalsGene Expression ProfilingGene Expression RegulationImmunologic FactorsImmunomodulationLarvaLife Cycle StagesMucous MembranePhylogenySequence Analysis, DNATranscriptomeTrichostrongyloideaImmunologic Factors

Identifiers

PMID28775251
PMCPMC5543109
OpenAlexW2741902370

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.