Evidence map›Paper›PMID 28774177›Full record

ArticleThe journal of physical chemistry. B2017

Intramolecular Interactions Overcome Hydration to Drive the Collapse Transition of Gly

D Asthagiri, Deepti Karandur, Dheeraj S Tomar, B Montgomery Pettitt

Open access · greenAbstract read
In one paragraph

Article in The journal of physical chemistry. B, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 33 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

D AsthagiriDepartment of Chemical and Biomolecular Engineering, Rice University , Houston, Texas, United States.ORCID 0000-0001-5869-0807
Deepti KarandurStructural and Computational Biology and Molecular Biophysics, Baylor College of Medicine , Houston, Texas, United States.
Dheeraj S TomarChemical and Biomolecular Engineering, Johns Hopkins University , Baltimore, Maryland, United States.
B Montgomery PettittSealy Center for Structural Biology and Molecular Biophysics, University of Texas Medical Branch , Galveston, Texas, United States.ORCID 0000-0003-4902-3046
Baylor College of Medicine · USJohns Hopkins University · USThe University of Texas Medical Branch at Galveston · US

Funding

Theory of Proteins and Peptides in SolutionR01GM037657 · NIGMS · UNIVERSITY OF TEXAS MED BR GALVESTON · PI PETTITT, BERNARD MONTGOMERY · 1988 to 2023
$5.5M
NIGMS NIH HHS R01 GM037657
6 · The paper itself

Abstract

Simulations and experiments show oligo-glycines, polypeptides lacking any side chains, can collapse in water. We assess the hydration thermodynamics of this collapse by calculating the hydration free energy at each of the end points of the reaction coordinate, here taken as the end-to-end distance (r) in the chain. To examine the role of the various conformations for a given r, we study the conditional distribution, P(R

Indexed as

AlgorithmsGlycineHydrophobic and Hydrophilic InteractionsPeptidesThermodynamicsWaterGlycinePeptidesWater

Identifiers

PMID28774177
PMCPMC5912879
OpenAlexW2743572695

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.