Evidence map›Paper›PMID 28771515›Full record

ArticlePloS one2017

The role of core and accessory type IV pilus genes in natural transformation and twitching motility in the bacterium Acinetobacter baylyi.

Colleen G Leong, Rebecca A Bloomfield, Caroline A Boyd, Amber J Dornbusch, Leah Lieber, Flora Liu, Amie Owen, Erin Slay, Kristine M Lang, C Phoebe Lostroh

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 34 papers.

0numbers the graph read from it
0cells of the map it votes in
34citing papers in PubMed
2.2field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

34 citing papers in PubMed, 60 citations in OpenAlex.

  1. Article
  2. Article
  3. Genome evolution ofApplied and environmental microbiology · 2025
    Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Article
  10. Type IV Pilus-Mediated Inhibition ofMicrobiology spectrum · 2023
    Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Bacterial Motility and Its Role in Skin and Wound Infections.International journal of molecular sciences · 2023
    Review
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 1 institution in 1 country.

Colleen G LeongDepartment of Molecular Biology, Colorado College, Colorado Springs, Colorado, United States of America.
Rebecca A BloomfieldDepartment of Molecular Biology, Colorado College, Colorado Springs, Colorado, United States of America.
Caroline A BoydDepartment of Molecular Biology, Colorado College, Colorado Springs, Colorado, United States of America.
Amber J DornbuschDepartment of Molecular Biology, Colorado College, Colorado Springs, Colorado, United States of America.
Leah LieberDepartment of Molecular Biology, Colorado College, Colorado Springs, Colorado, United States of America.
Flora LiuDepartment of Molecular Biology, Colorado College, Colorado Springs, Colorado, United States of America.
Amie OwenDepartment of Molecular Biology, Colorado College, Colorado Springs, Colorado, United States of America.
Erin SlayDepartment of Molecular Biology, Colorado College, Colorado Springs, Colorado, United States of America.
Kristine M LangDepartment of Physics, Colorado College, Colorado Springs, Colorado, United States of America.
C Phoebe LostrohDepartment of Molecular Biology, Colorado College, Colorado Springs, Colorado, United States of America.ORCID http://orcid.org/0000-0002-7956-9536
Colorado College · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Here we present an examination of type IV pilus genes associated with competence and twitching in the bacterium Acinetobacter baylyi (strain ADP1, BD413). We used bioinformatics to identify potential competence and twitching genes and their operons. We measured the competence and twitching phenotypes of the bioinformatically-identified genes. These results demonstrate that competence and twitching in A. baylyi both rely upon a core of the same type IV pilus proteins. The core includes the inner membrane assembly platform (PilC), a periplasmic assemblage connecting the inner membrane assembly platform to the secretin (ComM), a secretin (ComQ) and its associated pilotin (PilF) that assists with secretin assembly and localization, both cytoplasmic pilus retraction ATPases (PilU, PilT), and pilins (ComP, ComB, PilX). Proteins not needed for both competence and twitching are instead found to specialize in either of the two traits. The pilins are varied in their specialization with some required for either competence (FimT) and others for twitching (ComE). The protein that transports DNA across the inner membrane (ComA) specializes in competence, while signal transduction proteins (PilG, PilS, and PilR) specialize in twitching. Taken together our results suggest that the function of accessory proteins should not be based on homology alone. In addition the results suggest that in A. baylyi the mechanisms of natural transformation and twitching are mediated by the same set of core Type IV pilus proteins with distinct specialized proteins required for each phenotype. Finally, since competence requires multiple pilins as well as both pilus retraction motors PilU and PilT, this suggests that A. baylyi employs a pilus in natural transformation.

Indexed as

AcinetobacterAmino Acid SequenceBacterial ProteinsDNA, BacterialFimbriae, BacterialFimbriae ProteinsGenetic Complementation TestMembrane Transport ProteinsPhenotypeSequence AlignmentTransformation, BacterialBacterial ProteinsDNA, BacterialFimbriae ProteinsMembrane Transport Proteins

Identifiers

PMID28771515
PMCPMC5542475
OpenAlexW2744322705

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.