Evidence map›Paper›PMID 28768194›Full record

ArticleCell reports2017

A Conserved Splicing Silencer Dynamically Regulates O-GlcNAc Transferase Intron Retention and O-GlcNAc Homeostasis.

Sung-Kyun Park, Xiaorong Zhou, Kathryn E Pendleton, Olga V Hunter, Jennifer J Kohler, Kathryn A O'Donnell, Nicholas K Conrad

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 74 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
74citing papers in PubMed, 2 pooled it
4.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

74 citing papers in PubMed, 2 syntheses or guidelines pooled it, 127 citations in OpenAlex.

  1. Pooled it
  2. Pooled it
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  12. O-GlcNAc modulation of nuclear pore complexes orchestrates mRNA export efficiency.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  13. Review
  14. Article
  15. Article
  16. Review
  17. Perturbing nuclear glycosylation in the mouse preimplantation embryo slows down embryonic development.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
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  19. Article
  20. Article

14 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Sung-Kyun ParkDepartment of Microbiology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Xiaorong ZhouDepartment of Molecular Biology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Kathryn E PendletonDepartment of Microbiology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Olga V HunterDepartment of Microbiology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Jennifer J KohlerDepartment of Biochemistry, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Kathryn A O'DonnellDepartment of Molecular Biology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA; Harold C. Simmons Comprehensive Cancer Center, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA.
Nicholas K ConradDepartment of Microbiology, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA; Harold C. Simmons Comprehensive Cancer Center, University of Texas Southwestern Medical Center, Dallas, TX 75390, USA. Electronic address: nicholas.conrad@utsouthwestern.edu.
The University of Texas Southwestern Medical Center · US

Funding

Crosstalk between human mRNA nuclear export and polyadenylation machineriesR01GM113874 · NIGMS · UT SOUTHWESTERN MEDICAL CENTER · PI CONRAD, NICHOLAS K, FONTOURA, BEATRIZ MA · 2015 to 2018
$1.8M
Photocrosslinking probes to discover glycan-dependent interactionsR21DK112733 · NIDDK · UT SOUTHWESTERN MEDICAL CENTER · PI KOHLER, JENNIFER J · 2016 to 2018
$664k
NIDDK NIH HHS R21 DK112733NIGMS NIH HHS R01 GM113874
6 · The paper itself

Abstract

Modification of nucleocytoplasmic proteins with O-GlcNAc regulates a wide variety of cellular processes and has been linked to human diseases. The enzymes O-GlcNAc transferase (OGT) and O-GlcNAcase (OGA) add and remove O-GlcNAc, but the mechanisms regulating their expression remain unclear. Here, we demonstrate that retention of the fourth intron of OGT is regulated in response to O-GlcNAc levels. We further define a conserved intronic splicing silencer (ISS) that is necessary for OGT intron retention. Deletion of the ISS in colon cancer cells leads to increases in OGT, but O-GlcNAc homeostasis is maintained by concomitant increases in OGA protein. However, the ISS-deleted cells are hypersensitive to OGA inhibition in culture and in soft agar. Moreover, growth of xenograft tumors from ISS-deleted cells is compromised in mice treated with an OGA inhibitor. Thus, ISS-mediated regulation of OGT intron retention is a key component in OGT expression and maintaining O-GlcNAc homeostasis.

Indexed as

IntronsN-AcetylglucosaminyltransferasesNeoplasms, ExperimentalRNA SplicingAnimalsCell Line, TumorHumansMiceN-AcetylglucosaminyltransferasesO-GlcNAc transferaseintron retentionOGAO-GlcNAcO-GlcNAc homeostasisO-GlcNAc transferaseOGTOSMI-1RNA splicingsplicing silencerthiamet-G

Identifiers

PMID28768194
PMCPMC5588854
OpenAlexW2741776684

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.