Evidence map›Paper›PMID 28766873›Full record

ArticleMicrobiologyOpen2017

Analysis of nifH-RNA reveals phylotypes related to Geobacter and Cyanobacteria as important functional components of the N

Priscila A Calderoli, Mónica M Collavino, Filipe Behrends Kraemer, Héctor J M Morrás, O Mario Aguilar

Abstract read
In one paragraph

Article in MicrobiologyOpen, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

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  4. Frontiers in microbiology · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Priscila A CalderoliInstituto de Biotecnología y Biología Molecular (IBBM), Universidad Nacional de La Plata-CONICET, La Plata, Argentina.
Mónica M CollavinoInstituto de Botánica del Nordeste (IBONE), Facultad de Ciencias Agrarias, Universidad Nacional del Nordeste-CONICET, Corrientes, Argentina.
Filipe Behrends KraemerCátedra de Manejo y Conservación de Suelos, Facultad de Agronomía, Universidad de Buenos Aires, Buenos Aires, Argentina.
Héctor J M MorrásINTA-CIRN, Instituto de Suelos, Hurlingham, Provincia de Buenos Aires, Argentina.
O Mario AguilarInstituto de Biotecnología y Biología Molecular (IBBM), Universidad Nacional de La Plata-CONICET, La Plata, Argentina.ORCID 0000-0003-4186-3120

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In this survey, a total of 80 787 reads and 28 171 unique NifH protein sequences were retrieved from soil RNA. This dataset extends our knowledge about the structure and diversity of the functional diazotrophic communities in agricultural soils from Argentinean Pampas. Operational taxonomic unit (OTU)-based analyses showed that nifH phylotypes related to Geobacter and Anaeromyxobacter (44.8%), Rhizobiales (29%), Cyanobacteria (16.7%), and Verrucomicrobiales (8%) are key microbial components of N

Indexed as

PhylogenyRNA, BacterialSoil MicrobiologyAgricultureBiodiversityCyanobacteriaGene LibraryGeobacterNitrogen FixationOxidoreductasesPolymerase Chain ReactionSequence Analysis, DNAnitrogenase reductaseOxidoreductasesRNA, BacterialCyanobacteria and GeobacternifH transcriptssoil diazotrophic communitysoil management practices

Identifiers

PMID28766873
PMCPMC5635172

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.