Evidence map›Paper›PMID 28765641›Full record

ArticleScientific reports2017

Hypomethylation of CNTFRα is associated with proliferation and poor prognosis in lower grade gliomas.

Kun Fan, Xiaowen Wang, Jingwen Zhang, Romela Irene Ramos, Haibo Zhang, Chunjie Li, Dan Ye, Jiansheng Kang, Diego M Marzese, Dave S B Hoon and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed, 1 pooled it
0.8field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 1 synthesis or guideline pooled it, 24 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Identification of core biomarkers associated with pathogenesis and prognostic outcomes of laryngeal squamous-cell cancer using bioinformatics analysis.European archives of oto-rhino-laryngology : official journal of the European Federation of Oto-Rhino-Laryngological Societies (EUFOS) : affiliated with the German Society for Oto-Rhino-Laryngology - Head and Neck Surgery · 2020
    Article
  7. Article
  8. Article
  9. Use of Genome-Scale Integrated Analysis to Identify Key Genes and Potential Molecular Mechanisms in Recurrence of Lower-Grade Brain Glioma.Medical science monitor : international medical journal of experimental and clinical research · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 5 institutions in 2 countries.

Kun FanInstitutes of Biomedical Sciences, Shanghai Medical College, Fudan University, Shanghai, China.
Xiaowen WangDepartment of Neurosurgery, Huashan Hospital, Fudan University, Shanghai, China.
Jingwen ZhangDepartment of Ultrasound Diagnosis, Hebei General Hospital, Shijiazhuang, Hebei Province, China.
Romela Irene RamosDepartment of Translational Molecular Medicine, John Wayne Cancer Institute (JWCI), Providence Saint John Health Center, Santa Monica, CA, United States of America.
Haibo ZhangDepartment of Neurosurgery, Huashan Hospital, Fudan University, Shanghai, China.
Chunjie LiInstitutes of Biomedical Sciences, Shanghai Medical College, Fudan University, Shanghai, China.
Dan YeInstitutes of Biomedical Sciences, Shanghai Medical College, Fudan University, Shanghai, China.
Jiansheng KangInstitute for Nutritional Sciences, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, China.ORCID 0000-0002-2603-9718
Diego M MarzeseDepartment of Translational Molecular Medicine, John Wayne Cancer Institute (JWCI), Providence Saint John Health Center, Santa Monica, CA, United States of America.
Dave S B HoonDepartment of Translational Molecular Medicine, John Wayne Cancer Institute (JWCI), Providence Saint John Health Center, Santa Monica, CA, United States of America.ORCID 0000-0003-1915-3683
Wei HuaDepartment of Neurosurgery, Huashan Hospital, Fudan University, Shanghai, China. hs_glioma@126.com.
Fudan University · CNSaint John's Health Center · USShanghai Medical College of Fudan University · CNChinese Academy of Sciences · CNHebei General Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Ciliary neurotrophic factor receptor α subunit (CNTFRα) and CNTF play important roles in neuron survival, glial differentiation and brain tumor growth. However, the molecular mechanisms of CNTFRα regulation and its clinical significance in glioma remain largely unknown. Here, we found CNTFRα was overexpressed in lower grade gliomas (LGG) compared with glioblastoma (GBM) and normal brain specimens in TCGA datasets and in an independent cohort. Bioinformatics analysis revealed a CpG shore of the CNTFRα gene regulated its mRNA expression in TCGA datasets. This observation was further validated with clinical specimens and functionally verified using demethylating agents. Additionally, we observed that independent of IDH mutation status, methylation of CNTFRα was significantly correlated with down-regulated CNTFRα gene expression and longer LGG patient survival. Interestingly, combination of CNTFRα methylation and IDH mutation significantly (p < 0.05) improved the prognostic prediction in LGG patients. Furthermore, the role of CNTFRα in glioma proliferation and apoptosis through the PI3K/AKT pathways was demonstrated by supplementation with exogenous CNTF  in vitro and siRNA knockdown in vivo. Our study demonstrated that hypomethylation leading to CNTFRα up-regulation, together with autocrine expression of CNTF, was involved in glioma growth regulation. Importantly, DNA methylation of CNTFRα might serve as a potential epigenetic theranostic target for LGG patients.

Indexed as

Cell ProliferationDNA MethylationEpigenesis, GeneticCiliary Neurotrophic FactorCiliary Neurotrophic Factor Receptor alpha SubunitComputational BiologyGliomaHumansPrognosisSurvival AnalysisCiliary Neurotrophic FactorCiliary Neurotrophic Factor Receptor alpha Subunit

Identifiers

PMID28765641
PMCPMC5539284
OpenAlexW2738237395

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.