Evidence map›Paper›PMID 28765628›Full record

ArticleScientific reports2017

NOD2 gene variants confer risk for secondary sclerosing cholangitis in critically ill patients.

Christoph Jüngst, Vanessa Stadlbauer, Matthias C Reichert, Vincent Zimmer, Susanne N Weber, Lisa Ofner-Ziegenfuß, Torsten Voigtländer, Walter Spindelböck, Peter Fickert, Gabriele I Kirchner and 3 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Christoph JüngstDepartment of Medicine II, Saarland University Medical Center, Saarland University, Homburg, Germany.
Vanessa StadlbauerDivision of Gastroenterology and Hepatology, Medical University of Graz, Graz, Austria.ORCID 0000-0001-5508-8271
Matthias C ReichertDepartment of Medicine II, Saarland University Medical Center, Saarland University, Homburg, Germany.
Vincent ZimmerDepartment of Medicine II, Saarland University Medical Center, Saarland University, Homburg, Germany.
Susanne N WeberDepartment of Medicine II, Saarland University Medical Center, Saarland University, Homburg, Germany.
Lisa Ofner-ZiegenfußInstitute of Human Genetics, Medical University of Graz, Graz, Austria.
Torsten VoigtländerDepartment of Gastroenterology, Hepatology and Endocrinology, Hannover Medical School, Hannover, Germany.
Walter SpindelböckDivision of Gastroenterology and Hepatology, Medical University of Graz, Graz, Austria.
Peter FickertDivision of Gastroenterology and Hepatology, Medical University of Graz, Graz, Austria.
Gabriele I KirchnerDepartment of Internal Medicine I, University of Regensburg, Regensburg, Germany.
Frank LammertDepartment of Medicine II, Saarland University Medical Center, Saarland University, Homburg, Germany. frank.lammert@uks.eu.
Tim O LankischDepartment of Gastroenterology, Hepatology and Endocrinology, Hannover Medical School, Hannover, Germany.
Marcin KrawczykDepartment of Medicine II, Saarland University Medical Center, Saarland University, Homburg, Germany.
Saarland University · DEMedical University of Graz · ATMedizinische Hochschule Hannover · DEUniversity of Regensburg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sclerosing cholangitis in critically ill patients (SC-CIP) is a progressive cholestatic disease of unknown aetiology characterized by chronic biliary infections. Hence we hypothesized that common NOD2 (nucleotide-binding oligomerisation domain containing 2) gene variants, known risk factors for Crohn's disease and bacterial translocation in liver cirrhosis, increase the odds of developing SC-CIP. Screening of 4,641 endoscopic retrograde cholangiography procedures identified 17 patients with SC-CIP, who were then genotyped for the three common NOD2 mutations (Cohort 1, discovery cohort). To validate the association, we subsequently tested these NOD2 variants in 29 patients from SC-CIP cohorts of three additional medical centers (Cohort 2, replication cohort). In Cohort 1, the NOD2 variants were present in 5 of 17 SC-CIP patients (29.4%), which is twice the frequency of the general population. These results were replicated in Cohort 2 with 8 patients (27.6%) showing NOD2 mutations. In contrast, polymorphisms of hepatocanalicular transporter genes did not have major impact on SC-CIP risk. This first study on genetic susceptibility in SC-CIP patients shows an extraordinary high frequency of NOD2 variation, pointing to a critical role of inherited impaired anti-bacterial defense in the development of this devastating biliary disease.

Indexed as

Critical IllnessGenetic Predisposition to DiseaseCholangitis, SclerosingGenotypeHumansNod2 Signaling Adaptor ProteinRisk FactorsNOD2 protein, humanNod2 Signaling Adaptor Protein

Identifiers

PMID28765628
PMCPMC5539147
OpenAlexW2738052916

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.