Evidence map›Paper›PMID 28765364›Full record

ArticleThe Journal of cell biology2017

FiloQuant reveals increased filopodia density during breast cancer progression.

Guillaume Jacquemet, Ilkka Paatero, Alexandre F Carisey, Artur Padzik, Jordan S Orange, Hellyeh Hamidi, Johanna Ivaska

Open access · greenAbstract read
In one paragraph

Article in The Journal of cell biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 82 papers.

0numbers the graph read from it
0cells of the map it votes in
82citing papers in PubMed
6.8field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

82 citing papers in PubMed, 153 citations in OpenAlex.

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  14. The role and regulation of integrins in cell migration and invasion.Nature reviews. Molecular cell biology · 2025
    Review
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22 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Guillaume JacquemetTurku Centre for Biotechnology, University of Turku and Åbo Akademi University, Turku, Finland guillaume.jacquemet@utu.fi.ORCID 0000-0002-9286-920X
Ilkka PaateroTurku Centre for Biotechnology, University of Turku and Åbo Akademi University, Turku, Finland.
Alexandre F CariseyCenter for Human Immunobiology, Texas Children's Hospital, Houston, TX.ORCID 0000-0003-1326-2205
Artur PadzikTurku Centre for Biotechnology, University of Turku and Åbo Akademi University, Turku, Finland.
Jordan S OrangeCenter for Human Immunobiology, Texas Children's Hospital, Houston, TX.ORCID 0000-0001-7117-7725
Hellyeh HamidiTurku Centre for Biotechnology, University of Turku and Åbo Akademi University, Turku, Finland.
Johanna IvaskaTurku Centre for Biotechnology, University of Turku and Åbo Akademi University, Turku, Finland johanna.ivaska@utu.fi.ORCID 0000-0002-6295-6556
Åbo Akademi University · FIBaylor College of Medicine · US

Funding

Directing Function at the Natural Killer Cell Secretory Immunological SynapseR01AI067946 · NIAID · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI ORANGE, JORDAN SCOTT · 2007 to 2019
$4.8M
European Research Council 615258NIAID NIH HHS R01 AI067946
6 · The paper itself

Abstract

Defective filopodia formation is linked to pathologies such as cancer, wherein actively protruding filopodia, at the invasive front, accompany cancer cell dissemination. Despite wide biological significance, delineating filopodia function in complex systems remains challenging and is particularly hindered by lack of compatible methods to quantify filopodia properties. Here, we present FiloQuant, a freely available ImageJ plugin, to detect filopodia-like protrusions in both fixed- and live-cell microscopy data. We demonstrate that FiloQuant can extract quantifiable information, including protrusion dynamics, density, and length, from multiple cell types and in a range of microenvironments. In cellular models of breast ductal carcinoma in situ, we reveal a link between filopodia formation at the cell-matrix interface, in collectively invading cells and 3D tumor spheroids, and the in vitro invasive capacity of the carcinoma. Finally, using intravital microscopy, we observe that tumor spheroids display filopodia in vivo, supporting a potential role for these protrusions during tumorigenesis.

Indexed as

Tumor MicroenvironmentAnimalsBreast NeoplasmsCell Line, TumorFemaleHumansMicroscopy, ConfocalNeoplasm InvasivenessPseudopodiaRatsZebrafish

Identifiers

PMID28765364
PMCPMC5626550
OpenAlexW2740709913

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.