Evidence map›Paper›PMID 28761177›Full record

ArticleScientific reports2017

Analysis of autophagy gene polymorphisms in Spanish patients with head and neck squamous cell carcinoma.

Javier Fernández-Mateos, Raquel Seijas-Tamayo, Juan Carlos Adansa Klain, Miguel Pastor Borgoñón, Elisabeth Pérez-Ruiz, Ricard Mesía, Elvira Del Barco, Carmen Salvador Coloma, Antonio Rueda Dominguez, Javier Caballero Daroqui and 3 more

Abstract readMulticenter Study
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. Investigation ofMedicina (Kaunas, Lithuania) · 2019
    Pooled it
  3. Article
  4. Observational
  5. Article
  6. Article
  7. Article
  8. Gene polymorphisms and risk of head and neck squamous cell carcinoma: a systematic review.Reports of practical oncology and radiotherapy : journal of Greatpoland Cancer Center in Poznan and Polish Society of Radiation Oncology · 2022
    Review
  9. Article
  10. Article
  11. Gene polymorphisms and prognosis of head and neck squamous cell carcinoma: a systematic review.Reports of practical oncology and radiotherapy : journal of Greatpoland Cancer Center in Poznan and Polish Society of Radiation Oncology · 2022
    Review
  12. Article
  13. Article
  14. Pathogenic Single Nucleotide Polymorphisms on Autophagy-Related Genes.International journal of molecular sciences · 2020
    Review
  15. Article
  16. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Javier Fernández-MateosMedical Oncology Service, University Hospital of Salamanca-IBSAL, Salamanca, 37007, Spain.
Raquel Seijas-TamayoMedical Oncology Service, University Hospital of Salamanca-IBSAL, Salamanca, 37007, Spain.
Juan Carlos Adansa KlainMedical Oncology Service, University Hospital of Salamanca-IBSAL, Salamanca, 37007, Spain.
Miguel Pastor BorgoñónMedical Oncology Service, Hospital Universitario Politécnico La Fe, Valencia, 46026, Spain.
Elisabeth Pérez-RuizDivision of Medical Oncology, Oncology department, Agencia Sanitaria Hospital Costa del Sol de Marbella, 29603, Marbella, Spain.ORCID 0000-0001-7204-0800
Ricard MesíaMedical Oncology Department, Universitat de Barcelona, IDIBELL, Institut Català d'Oncologia, L'Hospitalet de Llobregat, Barcelona, 08908, Spain.
Elvira Del BarcoMedical Oncology Service, University Hospital of Salamanca-IBSAL, Salamanca, 37007, Spain.
Carmen Salvador ColomaMedical Oncology Service, Hospital Universitario Politécnico La Fe, Valencia, 46026, Spain.
Antonio Rueda DominguezDivision of Medical Oncology, Oncology department, Agencia Sanitaria Hospital Costa del Sol de Marbella, 29603, Marbella, Spain.
Javier Caballero DaroquiMedical Oncology Service, Hospital Universitario Politécnico La Fe, Valencia, 46026, Spain.
Encarnación Fernández RuizOtolaryngology Department, Agencia Sanitaria Hospital Costa del Sol de Marbella, Marbella, 29603, Spain.
Juan Jesús Cruz-HernándezMedical Oncology Service, University Hospital of Salamanca-IBSAL, Salamanca, 37007, Spain. ttcc@seom.org.
Rogelio González-SarmientoBiomedical Research Institute of Salamanca (IBSAL), SACYL-University of Salamanca-CSIC, Salamanca, 37007, Spain. gonzalez@usal.es.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Head and neck squamous cell carcinoma (HNSCC) is the sixth cancer on incidence worldwide. Tobacco and alcohol consumption are the most classical risk factors associated with its development. Autophagy process has a dual effect both in tumourigenesis and tumour suppressing activity. To investigate the importance of this pathway in HNSCC susceptibility, a risk factor matched case-control association study was performed with four candidate polymorphisms in autophagy genes (ATG2B, ATG5, ATG10, ATG16L1). We found an association between the variant in ATG10 rs1864183 and a higher susceptibility to develop laryngeal cancer, ATG2B rs3759601 and pharyngeal cancer and ATG16L1 rs2241880 and oral carcinoma. ATG5 rs2245214 SNP was not associated with any location. Overall, our results indicate the importance of the autophagy pathway in the susceptibility of head and neck squamous cell carcinoma and demonstrate the heterogeneity between its locations encompassed under a single terminology.

Indexed as

Polymorphism, Single NucleotideAdultAgedAutophagy-Related Protein 5Autophagy-Related ProteinsCase-Control StudiesGenetic Association StudiesGenetic Predisposition to DiseaseHead and Neck NeoplasmsHumansMaleMiddle AgedSpainSquamous Cell Carcinoma of Head and NeckVesicular Transport ProteinsATG10 protein, humanATG16L1 protein, humanATG2B protein, humanATG5 protein, humanAutophagy-Related Protein 5Autophagy-Related ProteinsVesicular Transport Proteins

Identifiers

PMID28761177
PMCPMC5537226

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.