Evidence map›Paper›PMID 28760958›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2017

Two interacting PPR proteins are major Arabidopsis editing factors in plastid and mitochondria.

Damien Guillaumot, Mauricio Lopez-Obando, Kevin Baudry, Alexandra Avon, Guillem Rigaill, Andéol Falcon de Longevialle, Benjamin Broche, Mizuki Takenaka, Richard Berthomé, Geert De Jaeger and 2 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed.

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  15. Article
  16. Plant organellar RNA maturation.The Plant cell · 2023
    Review
  17. Article
  18. Chromosome-level genome assembly ofFrontiers in plant science · 2023
    Article
  19. Article
  20. GRP23 plays a core role in E-type editosomes via interacting with MORFs and atypical PPR-DYWs inProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Damien GuillaumotInstitute of Plant Sciences Paris-Saclay (IPS2), CNRS, Institut National de la Recherche Agronomique (INRA), Université Paris-Sud, Université Evry, Université Paris-Saclay, 91405 Orsay, France.
Mauricio Lopez-ObandoInstitute of Plant Sciences Paris-Saclay (IPS2), CNRS, Institut National de la Recherche Agronomique (INRA), Université Paris-Sud, Université Evry, Université Paris-Saclay, 91405 Orsay, France.ORCID 0000-0002-1380-0643
Kevin BaudryInstitute of Plant Sciences Paris-Saclay (IPS2), CNRS, Institut National de la Recherche Agronomique (INRA), Université Paris-Sud, Université Evry, Université Paris-Saclay, 91405 Orsay, France.
Alexandra AvonInstitute of Plant Sciences Paris-Saclay (IPS2), CNRS, Institut National de la Recherche Agronomique (INRA), Université Paris-Sud, Université Evry, Université Paris-Saclay, 91405 Orsay, France.
Guillem RigaillInstitute of Plant Sciences Paris-Saclay (IPS2), CNRS, Institut National de la Recherche Agronomique (INRA), Université Paris-Sud, Université Evry, Université Paris-Saclay, 91405 Orsay, France.
Andéol Falcon de LongevialleInstitute of Plant Sciences Paris-Saclay (IPS2), CNRS, Institut National de la Recherche Agronomique (INRA), Université Paris-Sud, Université Evry, Université Paris-Saclay, 91405 Orsay, France.
Benjamin BrocheInstitute of Plant Sciences Paris-Saclay (IPS2), CNRS, Institut National de la Recherche Agronomique (INRA), Université Paris-Sud, Université Evry, Université Paris-Saclay, 91405 Orsay, France.
Mizuki TakenakaMolekulare Botanik, Universität Ulm, 89069 Ulm, Germany.
Richard BerthoméInstitute of Plant Sciences Paris-Saclay (IPS2), CNRS, Institut National de la Recherche Agronomique (INRA), Université Paris-Sud, Université Evry, Université Paris-Saclay, 91405 Orsay, France.
Geert De JaegerDepartment of Plant Biotechnology and Bioinformatics, Ghent University, 9052 Ghent, Belgium.
Etienne DelannoyInstitute of Plant Sciences Paris-Saclay (IPS2), CNRS, Institut National de la Recherche Agronomique (INRA), Université Paris-Sud, Université Evry, Université Paris-Saclay, 91405 Orsay, France.ORCID 0000-0002-0866-2063
Claire LurinInstitute of Plant Sciences Paris-Saclay (IPS2), CNRS, Institut National de la Recherche Agronomique (INRA), Université Paris-Sud, Université Evry, Université Paris-Saclay, 91405 Orsay, France; claire.lurin@inra.fr.ORCID 0000-0003-3516-4438

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

RNA editing is converting hundreds of cytosines into uridines during organelle gene expression of land plants. The pentatricopeptide repeat (PPR) proteins are at the core of this posttranscriptional RNA modification. Even if a PPR protein defines the editing site, a DYW domain of the same or another PPR protein is believed to catalyze the deamination. To give insight into the organelle RNA editosome, we performed tandem affinity purification of the plastidial CHLOROPLAST BIOGENESIS 19 (CLB19) PPR editing factor. Two PPR proteins, dually targeted to mitochondria and chloroplasts, were identified as potential partners of CLB19. These two proteins, a P-type PPR and a member of a small PPR-DYW subfamily, were shown to interact in yeast. Insertional mutations resulted in embryo lethality that could be rescued by embryo-specific complementation. A transcriptome analysis of these complemented plants showed major editing defects in both organelles with a very high PPR type specificity, indicating that the two proteins are core members of E+-type PPR editosomes.

Indexed as

ArabidopsisArabidopsis ProteinsChloroplastsMitochondriaRNA-Binding ProteinsRNA EditingArabidopsis ProteinsCLB19 protein, ArabidopsisPDM2 protein, ArabidopsisRNA-Binding Proteinsorganellespentatricopeptide repeatRNA editing

Identifiers

PMID28760958
PMCPMC5565446

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.