Evidence map›Paper›PMID 28760905›Full record

ArticleAntimicrobial agents and chemotherapy2017

A 2-Hydroxyisoquinoline-1,3-Dione Active-Site RNase H Inhibitor Binds in Multiple Modes to HIV-1 Reverse Transcriptase.

Karen A Kirby, Nataliya A Myshakina, Martin T Christen, Yue-Lei Chen, Hilary A Schmidt, Andrew D Huber, Zhaoyong Xi, Seongmi Kim, Rohit K Rao, Skyler T Kramer and 6 more

Abstract read
In one paragraph

Article in Antimicrobial agents and chemotherapy, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Review
  6. Article
  7. Binding thermodynamics of metal ions to HIV-1 ribonuclease H domain.Journal of thermal analysis and calorimetry · 2019
    Article
  8. Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Karen A KirbyChristopher S. Bond Life Sciences Center, University of Missouri, Columbia, Missouri, USA kirbyk@missouri.edu sarafianoss@missouri.edu.
Nataliya A MyshakinaDepartment of Microbiology and Molecular Genetics, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, USA.
Martin T ChristenDepartment of Structural Biology, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, USA.
Yue-Lei ChenCenter for Drug Design, Academic Health Center, University of Minnesota, Minneapolis, Minnesota, USA.
Hilary A SchmidtChristopher S. Bond Life Sciences Center, University of Missouri, Columbia, Missouri, USA.
Andrew D HuberChristopher S. Bond Life Sciences Center, University of Missouri, Columbia, Missouri, USA.
Zhaoyong XiDepartment of Structural Biology, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, USA.
Seongmi KimChristopher S. Bond Life Sciences Center, University of Missouri, Columbia, Missouri, USA.
Rohit K RaoChristopher S. Bond Life Sciences Center, University of Missouri, Columbia, Missouri, USA.
Skyler T KramerChristopher S. Bond Life Sciences Center, University of Missouri, Columbia, Missouri, USA.
Qiongying YangChristopher S. Bond Life Sciences Center, University of Missouri, Columbia, Missouri, USA.
Kamalendra SinghChristopher S. Bond Life Sciences Center, University of Missouri, Columbia, Missouri, USA.
Michael A ParniakDepartment of Microbiology and Molecular Genetics, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, USA.
Zhengqiang WangCenter for Drug Design, Academic Health Center, University of Minnesota, Minneapolis, Minnesota, USA.
Rieko IshimaDepartment of Structural Biology, University of Pittsburgh School of Medicine, Pittsburgh, Pennsylvania, USA.
Stefan G SarafianosChristopher S. Bond Life Sciences Center, University of Missouri, Columbia, Missouri, USA kirbyk@missouri.edu sarafianoss@missouri.edu.

Funding

Novel antivirals targeting the RNase H activity of HIV reverse transcriptaseR01AI100890 · NIAID · UNIVERSITY OF MISSOURI-COLUMBIA · PI SARAFIANOS, STEFAN G, WANG, ZHENGQIANG · 2012 to 2016
$3.6M
Conformational Dynamics and inhibitor responses of HIV-1 RT RNase H in solutionR01GM105401 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI ISHIMA, RIEKO · 2013 to 2016
$1.4M
Acylhydrazone inhibitors of HIV-1 ribonuclease HR01AI077424 · NIAID · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI ISHIMA, RIEKO, PARNIAK, MICHAEL A · 2009 to 2010
$749k
NIAID NIH HHS R01 AI077424NIAID NIH HHS R01 AI100890NIGMS NIH HHS R01 GM105401
6 · The paper itself

Abstract

The RNase H (RNH) function of HIV-1 reverse transcriptase (RT) plays an essential part in the viral life cycle. We report the characterization of YLC2-155, a 2-hydroxyisoquinoline-1,3-dione (HID)-based active-site RNH inhibitor. YLC2-155 inhibits both polymerase (50% inhibitory concentration [IC

Indexed as

Anti-HIV AgentsBinding SitesCatalytic DomainCrystallography, X-RayDrug DesignHIV-1HIV Reverse TranscriptaseHumansIsoquinolinesMicrobial Sensitivity TestsMolecular Docking SimulationProtein BindingReverse Transcriptase InhibitorsRibonuclease H2-hydroxyisoquinoline-1,3(2H,4H)-dioneAnti-HIV AgentsHIV Reverse TranscriptaseIsoquinolinesreverse transcriptase, Human immunodeficiency virus 1Reverse Transcriptase InhibitorsRibonuclease HYLC2-155human immunodeficiency virusinhibitorreverse transcriptaseRNase H

Identifiers

PMID28760905
PMCPMC5610509

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.