Evidence map›Paper›PMID 28760825›Full record

ArticleThe Journal of biological chemistry2017

Modulation of the extent of structural heterogeneity in α-synuclein fibrils by the small molecule thioflavin T.

Harish Kumar, Jogender Singh, Pratibha Kumari, Jayant B Udgaonkar

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.3field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Monitoring α-synuclein aggregation.Neurobiology of disease · 2023
    Review
  6. Review
  7. Article
  8. Review
  9. Article
  10. Article
  11. Article
  12. β-Amyloid aggregation and heterogeneous nucleation.Protein science : a publication of the Protein Society · 2019
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 3 countries.

Harish KumarFrom the National Centre for Biological Sciences, Tata Institute of Fundamental Research, Bengaluru 560065, India.
Jogender SinghFrom the National Centre for Biological Sciences, Tata Institute of Fundamental Research, Bengaluru 560065, India.
Pratibha KumariFrom the National Centre for Biological Sciences, Tata Institute of Fundamental Research, Bengaluru 560065, India.
Jayant B UdgaonkarFrom the National Centre for Biological Sciences, Tata Institute of Fundamental Research, Bengaluru 560065, India, jayant@ncbs.res.in.ORCID 0000-0002-7005-224X
Tata Institute of Fundamental Research · INDuke Medical Center · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The transition of intrinsically disordered, monomeric α-synuclein into β-sheet-rich oligomers and fibrils is associated with multiple neurodegenerative diseases. Fibrillar aggregates possessing distinct structures that differ in toxicity have been observed in different pathological phenotypes. Understanding the mechanism of the formation of various fibril polymorphs with differing cytotoxic effects is essential for determining how the aggregation reaction could be modulated to favor nontoxic fibrils over toxic fibrils. In this study, two morphologically different α-synuclein fibrils, one helical and the other ribbon-like, are shown to form together. Surprisingly, a widely used small molecule for probing aggregation reactions, thioflavin T (ThT), was found to tune the structural heterogeneity found in the fibrils. The ribbon-like fibrils formed in the presence of ThT were found to have a longer structural core than the helical fibrils formed in the absence of ThT. The ribbon-like fibrils are also more toxic to cells. By facilitating the formation of ribbon-like fibrils over helical fibrils, ThT reduced the extent of fibril polymorphism. This study highlights the role of a small molecule such as ThT in selectively favoring the formation of a specific type of fibril by binding to aggregates formed early on one of multiple pathways, thereby altering the structural core and external morphology of the fibrils formed.

Indexed as

Protein Aggregation, PathologicalProtein Multimerizationalpha-SynucleinBenzothiazolesHumansMultiprotein ComplexesThiazolesalpha-SynucleinBenzothiazolesMultiprotein ComplexesSNCA protein, humanThiazolesthioflavin Talpha-synuclein (α-synuclein)atomic force microscopy (AFM)fibril heterogeneityhydrogen exchange mass spectrometryneurodegenerative diseasethioflavin Ttoxicity

Identifiers

PMID28760825
PMCPMC5641877
OpenAlexW2741698468

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.