Evidence map›Paper›PMID 28760346›Full record

ArticleDevelopmental biology2017

A defect in the mitochondrial protein Mpv17 underlies the transparent casper zebrafish.

Gianluca D'Agati, Rosanna Beltre, Anna Sessa, Alexa Burger, Yi Zhou, Christian Mosimann, Richard M White

Open access · greenAbstract read
In one paragraph

Article in Developmental biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 58 papers.

0numbers the graph read from it
0cells of the map it votes in
58citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

58 citing papers in PubMed, 95 citations in OpenAlex.

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  16. Multi-spectral Fluorescent Reporter Influenza A Viruses Allow forbioRxiv : the preprint server for biology · 2023
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  18. An inducible model of chronic hyperglycemia.Disease models & mechanisms · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Gianluca D'AgatiInstitute of Molecular Life Sciences, University of Zürich, Zürich, Switzerland.
Rosanna BeltreHematology&Oncology, Children's Hospital Boston, Boston, MA, United States.
Anna SessaHematology&Oncology, Children's Hospital Boston, Boston, MA, United States.
Alexa BurgerInstitute of Molecular Life Sciences, University of Zürich, Zürich, Switzerland.
Yi ZhouHematology&Oncology, Children's Hospital Boston, Boston, MA, United States.
Christian MosimannInstitute of Molecular Life Sciences, University of Zürich, Zürich, Switzerland. Electronic address: christian.mosimann@imls.uzh.ch.
Richard M WhiteCancer Biology&Genetics, Memorial Sloan Kettering Cancer Center, New York, NY, United States; Department of Medicine, Memorial Sloan Kettering Cancer Center, New York, NY, United States. Electronic address: whiter@mskcc.org.
University of Zurich · CH

Funding

Evolutionary dynamics of melanoma metastasisDP2CA186572 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI WHITE, RICHARD MARK · 2013 to 2013
$2.7M
The role of melanocyte precursors in zebrafish pigmentation disordersK08AR055368 · NIAMS · SLOAN-KETTERING INST CAN RESEARCH · PI WHITE, RICHARD MARK · 2009 to 2013
$635k
NCI NIH HHS DP2 CA186572NIAMS NIH HHS K08 AR055368
6 · The paper itself

Abstract

The casper strain of zebrafish is widely used in studies ranging from cancer to neuroscience. casper offers the advantage of relative transparency throughout adulthood, making it particularly useful for in vivo imaging by epifluorescence, confocal, and light sheet microscopy. casper was developed by selective breeding of two previously described recessive pigment mutants: 1) nacre, which harbors an inactivating mutation of the mitfa gene, rendering the fish devoid of pigmented melanocytes; and 2) roy orbison, a mutant with a so-far unidentified genetic cause that lacks reflective iridophores. To clarify the molecular nature of the roy orbison mutation, such that it can inform studies using casper, we undertook an effort to positionally clone the roy orbison mutation. We find that roy orbison is caused by an intronic defect in the gene mpv17, encoding an inner mitochondrial membrane protein that has been implicated in the human mitochondrial DNA depletion syndrome. The roy orbison mutation is phenotypically and molecularly remarkably similar to another zebrafish iridophore mutant called transparent. Using Cas9-induced crispants and germline mutants with a disrupted mpv17 open reading frame, we show in trans-heterozygote embryos that new frameshift alleles of mpv17, roy orbison, and transparent fail to complement each other. Our work provides genetic evidence that both roy orbison and transparent affect the mpv17 locus by a similar if not identical genetic lesion. Identification of mpv17 mutants will allow for further work probing the relationship between mitochondrial function and pigmentation, which has to date received little attention.

Indexed as

AllelesAnimalsBase PairingBase SequenceChromosome MappingCRISPR-Cas SystemsDNA, MitochondrialGene Knockdown TechniquesGenetic LociMembrane ProteinsMitochondrial ProteinsMorpholinosMutagenesisMutationPhenotypePigmentationDNA, MitochondrialMembrane ProteinsMitochondrial ProteinsMorpholinosMpv17 protein, zebrafishRNA, MessengerZebrafish Proteins

Identifiers

PMID28760346
PMCPMC5617342
OpenAlexW2739911723

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.