Evidence map›Paper›PMID 28760199›Full record

ArticleeLife2017

Major satellite repeat RNA stabilize heterochromatin retention of Suv39h enzymes by RNA-nucleosome association and RNA:DNA hybrid formation.

Oscar Velazquez Camacho, Carmen Galan, Kalina Swist-Rosowska, Reagan Ching, Michael Gamalinda, Fethullah Karabiber, Inti De La Rosa-Velazquez, Bettina Engist, Birgit Koschorz, Nicholas Shukeir and 3 more

Open access · goldAbstract read
In one paragraph

Article in eLife, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 123 papers.

0numbers the graph read from it
0cells of the map it votes in
123citing papers in PubMed
7.1field-weighted citation impact, top 2% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

123 citing papers in PubMed, 174 citations in OpenAlex.

  1. Cross-species incompatibilities offer new insights into the functional consequences of satellite DNA evolution.Chromosome research : an international journal on the molecular, supramolecular and evolutionary aspects of chromosome biology · 2026
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  10. Downregulation of Gene Expression by Alpha Satellite Transcripts.International journal of molecular sciences · 2025
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  20. Identification of chromatin-associated RNAs at human centromeres.bioRxiv : the preprint server for biology · 2025
    Article

63 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 3 institutions in 2 countries.

Oscar Velazquez CamachoMax Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.ORCID 0000-0001-9811-6180
Carmen GalanMax Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.
Kalina Swist-RosowskaMax Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.
Reagan ChingMax Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.
Michael GamalindaMax Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.
Fethullah KarabiberYildiz Technical University, Istanbul, Turkey.
Inti De La Rosa-VelazquezMax Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.
Bettina EngistMax Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.
Birgit KoschorzMax Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.
Nicholas ShukeirMax Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.
Megumi Onishi-SeebacherMax Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.
Suzanne van de NobelenMax Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.
Thomas JenuweinMax Planck Institute of Immunobiology and Epigenetics, Freiburg, Germany.ORCID 0000-0002-0470-0421
Max Planck Institute of Immunobiology and Epigenetics · DEUniversity of Freiburg · DEYıldız Technical University · TR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Suv39h1 and Suv39h2 histone lysine methyltransferases are hallmark enzymes at mammalian heterochromatin. We show here that the mouse Suv39h2 enzyme differs from Suv39h1 by containing an N-terminal basic domain that facilitates retention at mitotic chromatin and provides an additional affinity for major satellite repeat RNA. To analyze an RNA-dependent interaction with chromatin, we purified native nucleosomes from mouse ES cells and detect that Suv39h1 and Suv39h2 exclusively associate with poly-nucleosomes. This association was attenuated upon RNaseH incubation and entirely lost upon RNaseA digestion of native chromatin. Major satellite repeat transcripts remain chromatin-associated and have a secondary structure that favors RNA:DNA hybrid formation. Together, these data reveal an RNA-mediated mechanism for the stable chromatin interaction of the Suv39h KMT and suggest a function for major satellite non-coding RNA in the organization of an RNA-nucleosome scaffold as the underlying structure of mouse heterochromatin.

Indexed as

Nucleic Acid HybridizationRepetitive Sequences, Nucleic AcidAnimalsDNAHeterochromatinHistone-Lysine N-MethyltransferaseMethyltransferasesMiceNucleosomesRepressor ProteinsRNADNAHeterochromatinHistone-Lysine N-MethyltransferaseMethyltransferasesNucleosomesRepressor ProteinsRNASuv39h1 protein, mouseSuv39h2 protein, mousechromosomesgenesmajor satellite repeatmousenon-coding RNApericentric heterochromatinRNA:DNA hybridsSuv39h1Suv39h2

Identifiers

PMID28760199
PMCPMC5538826
OpenAlexW2741586353

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.