ArticleBMC genomics2017
Development of a high-density linkage map and mapping of the three-pistil gene (Pis1) in wheat using GBS markers.
Article in BMC genomics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.
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23 citing papers in PubMed, 63 citations in OpenAlex.
- Structure variation-driven activation of TaWUS-D1 confers tri-pistil trait in wheat.Plant communications · 2026Article
- The Multi-Pistil Phenomenon in Higher Plants.Plants (Basel, Switzerland) · 2025Review
- Development and Validation of Kompetitive Allele-Specific Polymerase Chain Reaction Markers for Seed Protein Content in Soybean.Plants (Basel, Switzerland) · 2024Article
- Analysis of Altered Flowering Related Genes in a Multi-Silique Rapeseed (Plants (Basel, Switzerland) · 2023Article
- Gene co-expression modules behind the three-pistil formation in wheat.Functional & integrative genomics · 2023Article
- QTL mapping: insights into genomic regions governing component traits of yield under combined heat and drought stress in wheat.Frontiers in genetics · 2023Article
- Genotyping by Sequencing Advancements in Barley.Frontiers in plant science · 2022Review
- Construction of a genome-wide genetic linkage map and identification of quantitative trait loci for powdery mildew resistance inFrontiers in plant science · 2022Article
- Two fingerprinting sets for Humulus lupulus based on KASP and microsatellite markers.PloS one · 2022Article
- High-resolution mapping of the Mov-1 locus in wheat by combining radiation hybrid (RH) and recombination-based mapping approaches.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021Article
- VCF2CAPS-A high-throughput CAPS marker design from VCF files and its test-use on a genotyping-by-sequencing (GBS) dataset.PLoS computational biology · 2021Article
- Investigation of Thermomorphogenesis-Related Genes for a Multi-Silique Trait inFrontiers in genetics · 2021Article
- A high-density SNP-based linkage map using genotyping-by-sequencing and its utilization for improved genome assembly of chickpea (Cicer arietinum L.).Functional & integrative genomics · 2020Article
- Investigation for a multi-silique trait inPeerJ · 2020Article
- Article
- Genetic diversity, linkage disequilibrium, and population structure analysis of the tea plant (Camellia sinensis) from an origin center, Guizhou plateau, using genome-wide SNPs developed by genotyping-by-sequencing.BMC plant biology · 2019Article
- RicetissueTFDB: A Genome-Wide Identification of Tissue-Specific Transcription Factors in Rice.The plant genome · 2019Article
- GrainGenes: centralized small grain resources and digital platform for geneticists and breeders.Database : the journal of biological databases and curation · 2019Article
- High-density genetic map construction and mapping of the homologous transformation sterility gene (hts) in wheat using GBS markers.BMC plant biology · 2018Article
- Chromosome level high-density integrated genetic maps improve the Pyrus bretschneideri 'DangshanSuli' v1.0 genome.BMC genomics · 2018Article
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Authors and funding
6 authors at 1 institution in 1 country.
Funding
No grant is acknowledged in the PubMed record.
Abstract
backgroundThe wheat mutant line three-pistil (TP) exhibits three pistils per floret. As TP normally has two or three seeds in each of the florets on the same spike, there is the possibility of increasing the number of grains per spike. Therefore, TP is a highly valuable mutant for breeding and for the study of floral development in wheat. To map the three-pistil gene (Pis1), genotyping-by-sequencing single-nucleotide polymorphism (GBS-SNP) data from an F
resultsIn the present study, a high-density genetic map of wheat containing 2917 GBS-SNP markers was constructed. Twenty-one linkage groups were resolved, with a total length of 2371.40 cM. The individual chromosomes range from 2.64 cM to 454.55 cM with an average marker density of 0.81 cM. The Pis1 gene was mapped using this high-resolution map, and two flanking SNP markers tightly linked to the gene, M70 and M71, were identified. The Pis1 is 3.00 cM from M70 and 1.10 cM from M71. In bread wheat genome, M70 and M71 were found to delimit a physical distance of 3.40 Mb, which encompasses 127 protein-coding genes. To validate the GBS-generated genotypic data and to eliminate missing marker data in the Pis1 region, five Kompetitive Allele-Specific PCR (KASP) assays were designed from corresponding GBS sequences, which harbor SNPs that surround Pis1. Three KASP-SNP markers, KM70, KM71, and KM75, were remapped to the Pis1 gene region.
conclusionsThis work not only lays the foundation for the map-based cloning of Pis1 but can also serve as a valuable tool for studying marker-trait association of important traits and marker-assisted breeding in wheat.
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.