Evidence map›Paper›PMID 28758629›Full record

ArticleThe Journal of general virology2017

Identification and characterization of a Golgi retention signal in feline coronavirus accessory protein 7b.

Dominik Florek, Rosina Ehmann, Claudia Kristen-Burmann, Tanja Lemmermeyer, Günter Lochnit, John Ziebuhr, Heinz-Jürgen Thiel, Gergely Tekes

Open access · greenAbstract read
In one paragraph

Article in The Journal of general virology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.3field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 8 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Dominik FlorekInstitute of Virology, Justus Liebig University Giessen, Germany.
Rosina EhmannInstitute of Virology, Justus Liebig University Giessen, Germany.
Claudia Kristen-BurmannInstitute of Virology, Justus Liebig University Giessen, Germany.
Tanja LemmermeyerInstitute of Virology, Justus Liebig University Giessen, Germany.
Günter LochnitInstitute of Biochemistry, Justus Liebig University Giessen, Germany.
John ZiebuhrInstitute of Medical Virology, Justus Liebig University Giessen, Germany.
Heinz-Jürgen ThielInstitute of Virology, Justus Liebig University Giessen, Germany.
Gergely TekesInstitute of Virology, Justus Liebig University Giessen, Germany.
University of Giessen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Feline coronaviruses encode five accessory proteins with largely elusive functions. Here, one of these proteins, called 7b (206 residues), was investigated using a reverse genetic approach established for feline infectious peritonitis virus (FIPV) strain 79-1146. Recombinant FIPVs (rFPIVs) expressing mutant and/or FLAG-tagged forms of 7b were generated and used to investigate the expression, processing, glycosylation, localization and trafficking of the 7b protein in rFIPV-infected cells, focusing on a previously predicted ER retention signal, KTEL, at the C-terminus of 7b. The study revealed that 7b is N-terminally processed by a cellular signalase. The cleavage site, 17-Ala|Thr-18, was unambiguously identified by N-terminal sequence analysis of a 7b processing product purified from rFIPV-infected cells. Based on this information, rFIPVs expressing FLAG-tagged 7b proteins were generated and the effects of substitutions in the C-terminal 202KTEL206 sequence were investigated. The data show that (i) 7b localizes to and is retained in the medial- and/or trans-Golgi compartment, (ii) the C-terminal KTEL sequence acts as a Golgi [rather than an endoplasmic reticulum (ER)] retention signal, (iii) minor changes in the KTEL motif (such as KTE, KTEV, or the addition of a C-terminal tag) abolish Golgi retention, resulting in relocalization and secretion of 7b, and (iv) a KTEL-to-KDEL replacement causes retention of 7b in the ER of rFIPV-infected feline cells. Taken together, this study provides interesting new insights into an efficient Golgi retention signal that controls the cellular localization and trafficking of the FIPV 7b protein in virus-infected feline cells.

Indexed as

Amino Acid MotifsAmino Acid SequenceAnimalsCatsCoronavirus, FelineFeline Infectious PeritonitisGlycosylationGolgi ApparatusMolecular Sequence DataProtein Sorting SignalsProtein TransportViral Regulatory and Accessory ProteinsProtein Sorting SignalsViral Regulatory and Accessory Proteins

Identifiers

PMID28758629
PMCPMC7212014
OpenAlexW2740617762

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.