Evidence map›Paper›PMID 28757360›Full record

ArticleCell stem cell2017

Fusion of Regionally Specified hPSC-Derived Organoids Models Human Brain Development and Interneuron Migration.

Yangfei Xiang, Yoshiaki Tanaka, Benjamin Patterson, Young-Jin Kang, Gubbi Govindaiah, Naomi Roselaar, Bilal Cakir, Kun-Yong Kim, Adam P Lombroso, Sung-Min Hwang and 7 more

Abstract read
In one paragraph

Article in Cell stem cell, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 399 papers, 4 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
399citing papers in PubMed, 4 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

399 citing papers in PubMed, 4 syntheses or guidelines pooled it.

  1. Pooled it
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  8. Using Brain Organoids to Explore Human Neurobiology.Cellular and molecular neurobiology · 2026
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339 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

17 authors.

Yangfei XiangDepartment of Genetics, Yale Stem Cell Center, Yale School of Medicine, New Haven, CT 06520, USA.
Yoshiaki TanakaDepartment of Genetics, Yale Stem Cell Center, Yale School of Medicine, New Haven, CT 06520, USA.
Benjamin PattersonDepartment of Genetics, Yale Stem Cell Center, Yale School of Medicine, New Haven, CT 06520, USA.
Young-Jin KangDepartment of Neurology, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA.
Gubbi GovindaiahDepartment of Neurology, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA.
Naomi RoselaarDepartment of Genetics, Yale Stem Cell Center, Yale School of Medicine, New Haven, CT 06520, USA.
Bilal CakirDepartment of Genetics, Yale Stem Cell Center, Yale School of Medicine, New Haven, CT 06520, USA.
Kun-Yong KimDepartment of Genetics, Yale Stem Cell Center, Yale School of Medicine, New Haven, CT 06520, USA.
Adam P LombrosoDepartment of Biology, Program in Neuroscience and Behavior, Hall-Atwater Laboratory, Wesleyan University, Middletown, CT 06459, USA.
Sung-Min HwangDepartment of Genetics, Yale Stem Cell Center, Yale School of Medicine, New Haven, CT 06520, USA.
Mei ZhongDepartment of Cell Biology, Yale Stem Cell Center, Yale School of Medicine, New Haven, CT 06520, USA.
Edouard G StanleyMurdoch Childrens Research Institute, The Royal Children's Hospital, Parkville, VIC 3052, Australia; Department of Paediatrics, Faculty of Medicine, Dentistry and Health Sciences, University of Melbourne, Parkville, VIC 3052, Australia; Department of Anatomy and Developmental Biology, Faculty of Medicine, Nursing and Health Sciences, Monash University, Clayton, VIC 3800, Australia.
Andrew G ElefantyMurdoch Childrens Research Institute, The Royal Children's Hospital, Parkville, VIC 3052, Australia; Department of Paediatrics, Faculty of Medicine, Dentistry and Health Sciences, University of Melbourne, Parkville, VIC 3052, Australia; Department of Anatomy and Developmental Biology, Faculty of Medicine, Nursing and Health Sciences, Monash University, Clayton, VIC 3800, Australia.
Janice R NaegeleDepartment of Biology, Program in Neuroscience and Behavior, Hall-Atwater Laboratory, Wesleyan University, Middletown, CT 06459, USA.
Sang-Hun LeeDepartment of Neurology, University of Arkansas for Medical Sciences, Little Rock, AR 72205, USA.
Sherman M WeissmanDepartment of Genetics, Yale Stem Cell Center, Yale School of Medicine, New Haven, CT 06520, USA.
In-Hyun ParkDepartment of Genetics, Yale Stem Cell Center, Yale School of Medicine, New Haven, CT 06520, USA. Electronic address: inhyun.park@yale.edu.

Funding

Core-010UL1TR001073 · NCATS · ALBERT EINSTEIN COLLEGE OF MEDICINE, INC · PI KELLER, MARLA J, SHAMOON, HARRY · 2013 to 2017
$21.3M
CTSA INFRASTRUCTURE FOR PEDIATRIC RESEARCHUL1RR025750 · NCRR · ALBERT EINSTEIN COLLEGE OF MEDICINE · PI SHAMOON, HARRY · 2008 to 2011
$20.5M
Project 3: Effect of Age and Longevity Genes on Epigenomic MechanismsP01GM099130 · NIGMS · STANFORD UNIVERSITY · PI WEISSMAN, SHERMAN MORTON · 2011 to 2015
$11.4M
Telemedicine CoreP30GM110702 · NIGMS · UNIV OF ARKANSAS FOR MED SCIS · PI GARCIA-RILL, EDGAR E. · 2014 to 2018
$6.1M
Investigation of the function of methylated DNA binding protein in reprogrammingR01GM111667 · NIGMS · YALE UNIVERSITY · PI PARK, IN-HYUN · 2014 to 2018
$1.6M
NCATS NIH HHS UL1 TR001073NCRR NIH HHS UL1 RR025750NIGMS NIH HHS P01 GM099130NIGMS NIH HHS P30 GM110702NIGMS NIH HHS R01 GM111667
6 · The paper itself

Abstract

Organoid techniques provide unique platforms to model brain development and neurological disorders. Whereas several methods for recapitulating corticogenesis have been described, a system modeling human medial ganglionic eminence (MGE) development, a critical ventral brain domain producing cortical interneurons and related lineages, has been lacking until recently. Here, we describe the generation of MGE and cortex-specific organoids from human pluripotent stem cells that recapitulate the development of MGE and cortex domains, respectively. Population and single-cell RNA sequencing (RNA-seq) profiling combined with bulk assay for transposase-accessible chromatin with high-throughput sequencing (ATAC-seq) analyses revealed transcriptional and chromatin accessibility dynamics and lineage relationships during MGE and cortical organoid development. Furthermore, MGE and cortical organoids generated physiologically functional neurons and neuronal networks. Finally, fusing region-specific organoids followed by live imaging enabled analysis of human interneuron migration and integration. Together, our study provides a platform for generating domain-specific brain organoids and modeling human interneuron migration and offers deeper insight into molecular dynamics during human brain development.

Indexed as

Cell MovementModels, BiologicalBrainCell DifferentiationCell LineageCerebral CortexChromatinHumansInterneuronsMedian EminenceOrganoidsPluripotent Stem CellsSequence Analysis, RNATranscriptomeChromatinATAC-seqbrain organoidcortexfusionhESCinterneuronMGEneuronal migrationsingle cell RNA-seqtranscriptional regulation

Identifiers

PMID28757360
PMCPMC5720381

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.