Evidence map›Paper›PMID 28756535›Full record

ArticleBreast cancer research and treatment2017

FOXA1 hypermethylation: link between parity and ER-negative breast cancer in African American women?

Allyson C Espinal, Matthew F Buas, Dan Wang, David Ting-Yuan Cheng, Lara Sucheston-Campbell, Qiang Hu, Li Yan, Rochelle Payne-Ondracek, Eduardo Cortes, Li Tang and 10 more

Open access · greenAbstract read
In one paragraph

Article in Breast cancer research and treatment, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
1.6field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 42 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Epigenetic and Immune Mechanisms Linking Breastfeeding to Lower Breast Cancer Rates.Medical science monitor : international medical journal of experimental and clinical research · 2024
    Review
  5. Response to: Comment on Genetic Ancestry-Specific Molecular and Survival Differences in Admixed Breast Cancer Patients.Annals of surgery open : perspectives of surgical history, education, and clinical approaches · 2024
    Article
  6. Article
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  14. Article
  15. Deletion ofAmerican journal of cancer research · 2021
    Article
  16. Article
  17. Review
  18. Racial differences in CD8Breast cancer research : BCR · 2020
    Article
  19. Racial Differences in the Association Between Luminal Master Regulator Gene Expression Levels and Breast Cancer Survival.Clinical cancer research : an official journal of the American Association for Cancer Research · 2020
    Article
  20. FOXA1 Protein Expression in ERCancer epidemiology, biomarkers & prevention : a publication of the American Association for Cancer Research, cosponsored by the American Society of Preventive Oncology · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 3 institutions in 1 country.

Allyson C EspinalDepartment of Molecular and Cellular Biology, Roswell Park Cancer Institute, Elm & Carlton Sts, Buffalo, NY, 14263, USA.
Matthew F BuasDepartment of Cancer Prevention and Control, Roswell Park Cancer Institute, Elm & Carlton Sts, Buffalo, NY, 14263, USA.
Dan WangDepartment of Biostatistics and Bioinformatics, Roswell Park Cancer Institute, Buffalo, NY, USA.
David Ting-Yuan ChengDepartment of Cancer Prevention and Control, Roswell Park Cancer Institute, Elm & Carlton Sts, Buffalo, NY, 14263, USA.
Lara Sucheston-CampbellThe Ohio State University, Columbus, OH, USA.
Qiang HuDepartment of Biostatistics and Bioinformatics, Roswell Park Cancer Institute, Buffalo, NY, USA.
Li YanDepartment of Biostatistics and Bioinformatics, Roswell Park Cancer Institute, Buffalo, NY, USA.
Rochelle Payne-OndracekDepartment of Cancer Prevention and Control, Roswell Park Cancer Institute, Elm & Carlton Sts, Buffalo, NY, 14263, USA.
Eduardo CortesDepartment of Biostatistics and Bioinformatics, Roswell Park Cancer Institute, Buffalo, NY, USA.
Li TangDepartment of Cancer Prevention and Control, Roswell Park Cancer Institute, Elm & Carlton Sts, Buffalo, NY, 14263, USA.
Zhihong GongDepartment of Cancer Prevention and Control, Roswell Park Cancer Institute, Elm & Carlton Sts, Buffalo, NY, 14263, USA.
Gary ZirpoliDepartment of Cancer Prevention and Control, Roswell Park Cancer Institute, Elm & Carlton Sts, Buffalo, NY, 14263, USA.
Thaer KhouryDepartment of Pathology, Roswell Park Cancer Institute, Buffalo, NJ, USA.
Song YaoDepartment of Cancer Prevention and Control, Roswell Park Cancer Institute, Elm & Carlton Sts, Buffalo, NY, 14263, USA.
Angela OmilianDepartment of Pathology, Roswell Park Cancer Institute, Buffalo, NJ, USA.
Kitaw DemissieDepartment of Epidemiology, Rutgers School of Public Health and Cancer Institute of New Jersey, New Jersey, USA.
Elisa V BanderaRutgers Cancer Institute of New Jersey, New Brunswick, NJ, USA.
Song LiuDepartment of Biostatistics and Bioinformatics, Roswell Park Cancer Institute, Buffalo, NY, USA.
Christine B AmbrosoneDepartment of Cancer Prevention and Control, Roswell Park Cancer Institute, Elm & Carlton Sts, Buffalo, NY, 14263, USA. Christine.ambrosone@roswellpark.org.
Michael J HigginsDepartment of Molecular and Cellular Biology, Roswell Park Cancer Institute, Elm & Carlton Sts, Buffalo, NY, 14263, USA. Michael.higgins@roswellpark.org.
Roswell Park Comprehensive Cancer Center · USRutgers Cancer Institute of New JerseyThe Ohio State University · US

Funding

Two-Spirit Films in Indigenous Cancer HealthP30CA016056 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI MARK G FRATTINI · 1985 to 2026
$116.6M
Reproduction, Lactation and Hormonal Factors in Breast Cancer SubtypesP01CA151135 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI AMBROSONE, CHRISTINE B., OLSHAN, ANDREW · 2011 to 2017
$18.1M
Race &Risk Factors for Early/Aggressive Breast CancerR01CA100598 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI AMBROSONE, CHRISTINE B. · 2004 to 2008
$4.8M
The Biology of Prostate Stem Cells - Resubmission - 1R01CA132641 · NCI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI WILSON, ELAINE LYNETTE · 2007 to 2017
$4.0M
DNA Methylation: a Mechanism for Aggressive Breast Cancer in African-American WomR01CA133264 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI AMBROSONE, CHRISTINE B., DEMISSIE, KITAW · 2010 to 2013
$3.6M
Aberrant DNA methylation patterns of miRNAs and breast cancer racial disparitiesK07CA178293 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI GONG, ZHIHONG · 2014 to 2018
$720k
mTOR pathway in breast cancer subtypes by race: A molecular pathological studyK07CA201334 · NCI · UNIVERSITY OF FLORIDA · PI CHENG, TING-YUAN · 2016 to 2020
$693k
PDEF and survivin: cancer prognosis, initiation, progression and metastasisR01CA133241 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI LI, FENGZHI · 2009 to 2010
$674k
NCI NIH HHS K07 CA178293NCI NIH HHS K07 CA201334NCI NIH HHS P01 CA151135NCI NIH HHS P30 CA016056NCI NIH HHS R01 CA100598NCI NIH HHS R01 CA132641NCI NIH HHS R01 CA133241NCI NIH HHS R01 CA133264
6 · The paper itself

Abstract

backgroundReproductive factors, particularly parity, have differential effects on breast cancer risk according to estrogen receptor (ER) status, especially among African American (AA) women. One mechanism could be through DNA methylation, leading to altered expression levels of genes important in cell fate decisions.

methodsUsing the Illumina 450K BeadChip, we compared DNA methylation levels in paraffin-archived tumor samples from 383 AA and 350 European American (EA) women in the Women's Circle of Health Study (WCHS). We combined 450K profiles with RNA-seq data and prioritized genes based on differential methylation by race, correlation between methylation and gene expression, and biological function. We measured tumor protein expression and assessed its relationship to DNA methylation. We evaluated associations between reproductive characteristics and DNA methylation using linear regression.

results410 loci were differentially methylated by race, with the majority unique to ER- tumors. FOXA1 was hypermethylated in tumors from AA versus EA women with ER- cancer, and increased DNA methylation correlated with reduced RNA and protein expression. Importantly, parity was positively associated with FOXA1 methylation among AA women with ER- tumors (P = 0.022), as was number of births (P = 0.026), particularly among those who did not breastfeed (P = 0.008). These same relationships were not observed among EA women, although statistical power was more limited.

conclusionsMethylation and expression of FOXA1 is likely impacted by parity and breastfeeding. Because FOXA1 regulates a luminal gene expression signature in progenitor cells and represses the basal phenotype, this could be a mechanism that links these reproductive exposures with ER- breast cancer.

Indexed as

DNA MethylationBlack or African AmericanBreast FeedingBreast NeoplasmsDown-RegulationFemaleGenetic Association StudiesHepatocyte Nuclear Factor 3-alphaHigh-Throughput Nucleotide SequencingHumansLinear ModelsParityReceptors, EstrogenSequence Analysis, DNASequence Analysis, RNAWhite PeopleFOXA1 protein, humanHepatocyte Nuclear Factor 3-alphaReceptors, EstrogenAfrican AmericanBreast cancerDisparitiesDNA methylationER− breast cancerFOXA1

Identifiers

PMID28756535
PMCPMC5761729
OpenAlexW2740705782

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.