Evidence map›Paper›PMID 28749957›Full record

ArticlePloS one2017

Delineation of the role of chromatin assembly and the Rtt101Mms1 E3 ubiquitin ligase in DNA damage checkpoint recovery in budding yeast.

Li-Ting Diao, Chin-Chuan Chen, Briana Dennehey, Sangita Pal, Pingping Wang, Zie-Jie Shen, Angela Deem, Jessica K Tyler

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.3field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 18 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Li-Ting DiaoDepartment of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, New York, United States of America.
Chin-Chuan ChenDepartment of Epigenetics and Molecular Carcinogenesis, University of Texas, MD Anderson Cancer Center, Houston, Texas, United States of America.
Briana DenneheyDepartment of Epigenetics and Molecular Carcinogenesis, University of Texas, MD Anderson Cancer Center, Houston, Texas, United States of America.
Sangita PalDepartment of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, New York, United States of America.
Pingping WangDepartment of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, New York, United States of America.
Zie-Jie ShenDepartment of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, New York, United States of America.
Angela DeemDepartment of Epigenetics and Molecular Carcinogenesis, University of Texas, MD Anderson Cancer Center, Houston, Texas, United States of America.
Jessica K TylerDepartment of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, New York, United States of America.ORCID http://orcid.org/0000-0001-9765-1659
Cornell University · USThe University of Texas MD Anderson Cancer Center · US

Funding

Chromatin's Role in Repair of Radiation-induced Damage.R01CA095641 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI TYLER, JESSICA K · 2002 to 2023
$5.2M
NCI NIH HHS R01 CA095641
6 · The paper itself

Abstract

The DNA damage checkpoint is activated in response to DNA double-strand breaks (DSBs). We had previously shown that chromatin assembly mediated by the histone chaperone Asf1 triggers inactivation of the DNA damage checkpoint in yeast after DSB repair, also called checkpoint recovery. Here we show that chromatin assembly factor 1 (CAF-1) also contributes to chromatin reassembly after DSB repair, explaining its role in checkpoint recovery. Towards understanding how chromatin assembly promotes checkpoint recovery, we find persistent presence of the damage sensors Ddc1 and Ddc2 after DSB repair in asf1 mutants. The genes encoding the E3 ubiquitin ligase complex Rtt101Mms1 are epistatic to ASF1 for survival following induction of a DSB, and Rtt101Mms1 are required for checkpoint recovery after DSB repair but not for chromatin assembly. By contrast, the Mms22 substrate adaptor that is degraded by Rtt101Mms1 is required for DSB repair per se. Deletion of MMS22 blocks loading of Rad51 at the DSB, while deletion of ASF1 or RTT101 leads to persistent Rad51 loading. We propose that checkpoint recovery is promoted by Rtt101Mms1-mediated ubiquitylation of Mms22 in order to halt Mms22-dependent loading of Rad51 onto double-stranded DNA after DSB repair, in concert with the chromatin assembly-mediated displacement of Rad51 and checkpoint sensors from the site of repair.

Indexed as

Cell Cycle CheckpointsChromatin Assembly and DisassemblyDNA DamageAcetylationChromatin ImmunoprecipitationCullin ProteinsDNA Breaks, Double-StrandedDNA RepairHistonesLysineSaccharomyces cerevisiae ProteinsSaccharomycetalesTranscription, GeneticCullin ProteinsHistonesLysineMms1 protein, S cerevisiaeRTT101 protein, S cerevisiaeSaccharomyces cerevisiae Proteins

Identifiers

PMID28749957
PMCPMC5531559
OpenAlexW2739914115

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.