Evidence map›Paper›PMID 28749597›Full record

ArticleJournal of computational chemistry2018

A Structural Model of Nitro-Porphyrin Dyes Based on Spectroscopy and Density Functional Theory.

Christopher Farley, Amit Aggarwal, Sunaina Singh, Aaron Dolor, Philip To, Alexander Falber, Maxwell Crossley, Charles Michael Drain

Abstract read
In one paragraph

Article in Journal of computational chemistry, 2018. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
0.5field-weighted citation impact, top 41% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 14 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 6 institutions in 2 countries.

Christopher FarleyDepartment of Chemistry, Hunter College of the City University of New York, New York, New York, 10065.ORCID 0000-0002-7787-5134
Amit AggarwalDepartment of Natural Sciences, LaGuardia Community College of the City University of New York, Long Island City, New York, 11101.
Sunaina SinghDepartment of Natural Sciences, LaGuardia Community College of the City University of New York, Long Island City, New York, 11101.
Aaron DolorDepartment of Bioengineering, Therapeutic Sciences and Pharmaceutical Chemistry, University of California San Francisco, San Francisco, California, 94143.
Philip ToDepartment of Chemistry, Hunter College of the City University of New York, New York, New York, 10065.
Alexander FalberSchool of Chemistry, The University of New South Wales, Sydney, New South Wales, 2052, Australia.
Maxwell CrossleySchool of Chemistry, The University of Sydney, Sydney, New South Wales, 2006, Australia.
Charles Michael DrainDepartment of Chemistry, Hunter College of the City University of New York, New York, New York, 10065.
City University of New York · USLaGuardia Community College · USThe Graduate Center, CUNY · USThe University of Sydney · AUUniversity of California, San Francisco · USUNSW Sydney · AU

Funding

RISE Program Hunter College Option IIIR25GM060665 · NIGMS · HUNTER COLLEGE · PI ORTIZ, BENJAMIN D.,, SERRANO, PETER A · 2000 to 2022
$22.8M
Basic and Translational Research Center for Reducing Health DisparitiesG12MD007599 · NIMHD · HUNTER COLLEGE · PI ANGULO, JESUS A · 2012 to 2017
$14.6M
NIGMS NIH HHS R25 GM060665NIMHD NIH HHS G12 MD007599
6 · The paper itself

Abstract

Nitro-porphyrins are an important class of commercial dyes with a range of potential applications. The nitro group is known to dramatically affect the photophysics of the porphyrin, but there are few systematic investigations of the contributing factors. To address this deficiency, we present spectroscopic studies of a series of nitro-porphyrins, accompanied by density functional theory calculations to elucidate their structures. In particular, we explore how the positions of the substituents affect the energy levels and nuclear geometry. As expected, nitro groups on the meso-phenyl rings cause small changes to the orbital energies by induction, while those at the β-pyrrole positions more strongly conjugate into the aromatic system. In addition, however, we find evidence that β-pyrrole nitro groups distort the porphyrin, creating two non-planar conformations with distinct properties. This unexpected result helps explain the anomalous photophysics of nitro-porphyrins reported throughout the literature, including inhomogeneous line broadening and biexponential fluorescence decay. © 2017 Wiley Periodicals, Inc.

Indexed as

Density Functional TheoryColoring AgentsModels, MolecularMolecular StructureNitro CompoundsPorphyrinsSpectrometry, FluorescenceSpectrophotometry, UltravioletColoring AgentsNitro CompoundsPorphyrinscharge transferdensity functional theoryphotophysicsporphyrinsspectroscopy

Identifiers

PMID28749597
PMCPMC5899044
OpenAlexW2741946990

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.