Evidence map›Paper›PMID 28749340›Full record

ArticleeLife2017

Super-resolution imaging of synaptic and Extra-synaptic AMPA receptors with different-sized fluorescent probes.

Sang Hak Lee, Chaoyi Jin, En Cai, Pinghua Ge, Yuji Ishitsuka, Kai Wen Teng, Andre A de Thomaz, Duncan Nall, Murat Baday, Okunola Jeyifous and 6 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in eLife, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed, 77 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Synapse-type-specific competitive Hebbian learning forms functional recurrent networks.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
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  7. Review
  8. Article
  9. Subunit-Dependent Surface Mobility and Localization of NMDA Receptors in Hippocampal Neurons Measured Using Nanobody Probes.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2023
    Article
  10. Article
  11. Article
  12. Article
  13. Structural Design of Multidentate Copolymers as Compact Quantum Dot Coatings for Live-Cell Single-Particle Imaging.Chemistry of materials : a publication of the American Chemical Society · 2022
    Article
  14. Review
  15. Review
  16. Article
  17. Article
  18. Antibody Self-Assembly Maximizes Cytoplasmic Immunostaining Accuracy of Compact Quantum Dots.Chemistry of materials : a publication of the American Chemical Society · 2021
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

16 authors at 3 institutions in 1 country.

Sang Hak LeeDepartment of Physics, Center for Biophysics, and Quantitative Biology, and Center for the Physics of Living Cells, University of Illinois, Urbana-Champaign, Champaign, United States.ORCID http://orcid.org/0000-0003-3434-076X
Chaoyi JinDepartment of Physics, Center for Biophysics, and Quantitative Biology, and Center for the Physics of Living Cells, University of Illinois, Urbana-Champaign, Champaign, United States.
En CaiDepartment of Physics, Center for Biophysics, and Quantitative Biology, and Center for the Physics of Living Cells, University of Illinois, Urbana-Champaign, Champaign, United States.
Pinghua GeDepartment of Physics, Center for Biophysics, and Quantitative Biology, and Center for the Physics of Living Cells, University of Illinois, Urbana-Champaign, Champaign, United States.
Yuji IshitsukaDepartment of Physics, Center for Biophysics, and Quantitative Biology, and Center for the Physics of Living Cells, University of Illinois, Urbana-Champaign, Champaign, United States.
Kai Wen TengDepartment of Physics, Center for Biophysics, and Quantitative Biology, and Center for the Physics of Living Cells, University of Illinois, Urbana-Champaign, Champaign, United States.
Andre A de ThomazDepartment of Physics, Center for Biophysics, and Quantitative Biology, and Center for the Physics of Living Cells, University of Illinois, Urbana-Champaign, Champaign, United States.
Duncan NallDepartment of Physics, Center for Biophysics, and Quantitative Biology, and Center for the Physics of Living Cells, University of Illinois, Urbana-Champaign, Champaign, United States.
Murat BadayDepartment of Physics, Center for Biophysics, and Quantitative Biology, and Center for the Physics of Living Cells, University of Illinois, Urbana-Champaign, Champaign, United States.
Okunola JeyifousDepartment of Neurobiology, University of Chicago and the Marine Biological Laboratory, Chicago, United States.
Daniel DemonteDepartment of Chemical and Biological Engineering, University at Buffalo, Buffalo, United States.
Christopher M DundasDepartment of Chemical and Biological Engineering, University at Buffalo, Buffalo, United States.
Sheldon ParkDepartment of Chemical and Biological Engineering, University at Buffalo, Buffalo, United States.
Jary Y DelgadoDepartment of Neurobiology, University of Chicago and the Marine Biological Laboratory, Chicago, United States.
William N GreenDepartment of Neurobiology, University of Chicago and the Marine Biological Laboratory, Chicago, United States.ORCID http://orcid.org/0000-0003-2167-1391
Paul R SelvinDepartment of Physics, Center for Biophysics, and Quantitative Biology, and Center for the Physics of Living Cells, University of Illinois, Urbana-Champaign, Champaign, United States.ORCID http://orcid.org/0000-0002-3658-4218
University of Illinois Urbana-Champaign · USMarine Biological Laboratory · USUniversity at Buffalo, State University of New York · US

Funding

Super-Resolution Microscopy of Neuronal Synapses with Small Quantum Dots and Advanced Imaging ToolsR01NS100019 · NINDS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI CHUNG, HEE JUNG, SELVIN, PAUL R · 2017 to 2025
$3.2M
Organization and Dynamics of PSD-bound Glutamate Receptors at Super-resolutionR56NS090903 · NINDS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI GREEN, WILLIAM, SELVIN, PAUL R · 2014 to 2014
$660k
NINDS NIH HHS R01 NS100019NINDS NIH HHS R56 NS090903
6 · The paper itself

Abstract

Previous studies tracking AMPA receptor (AMPAR) diffusion at synapses observed a large mobile extrasynaptic AMPAR pool. Using super-resolution microscopy, we examined how fluorophore size and photostability affected AMPAR trafficking outside of, and within, post-synaptic densities (PSDs) from rats. Organic fluorescent dyes (≈4 nm), quantum dots, either small (≈10 nm diameter; sQDs) or big (>20 nm; bQDs), were coupled to AMPARs via different-sized linkers. We find that >90% of AMPARs labeled with fluorescent dyes or sQDs were diffusing in confined nanodomains in PSDs, which were stable for 15 min or longer. Less than 10% of sQD-AMPARs were extrasynaptic and highly mobile. In contrast, 5-10% of bQD-AMPARs were in PSDs and 90-95% were extrasynaptic as previously observed. Contrary to the hypothesis that AMPAR entry is limited by the occupancy of open PSD 'slots', our findings suggest that AMPARs rapidly enter stable 'nanodomains' in PSDs with lifetime

Indexed as

AnimalsEmbryo, MammalianExcitatory Postsynaptic PotentialsFluorescent DyesGene ExpressionGreen Fluorescent ProteinsHippocampusNeuronsOptical ImagingPost-Synaptic DensityPrimary Cell CultureProtein TransportQuantum DotsRatsReceptors, AMPAStaining and Labelingenhanced green fluorescent proteinFluorescent DyesGreen Fluorescent ProteinsReceptors, AMPAAMAP receptorsbiophysicsglutamate receptorneuroscienceratsingle molecule trackingsmall qdotsstructural biologysuper-resolution imagingsynapses

Identifiers

PMID28749340
PMCPMC5779237
OpenAlexW2560919008

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.