Evidence map›Paper›PMID 28748222›Full record

ArticleWellcome open research2017

An improved

Erica M Pasini, Ulrike Böhme, Gavin G Rutledge, Annemarie Voorberg-Van der Wel, Mandy Sanders, Matt Berriman, Clemens Hm Kocken, Thomas Dan Otto

Open access · goldAbstract read
In one paragraph

Article in Wellcome open research, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
5.7field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Microorganisms · 2024
    Review
  6. Article
  7. Transfection Models to InvestigatePathogens (Basel, Switzerland) · 2023
    Review
  8. Malaria Genomics, Vaccine Development, and Microbiome.Pathogens (Basel, Switzerland) · 2023
    Review
  9. Review
  10. Article
  11. Article
  12. Review
  13. Review
  14. Review
  15. Review
  16. Article
  17. Zoonotic Malaria: Non-Pathogens (Basel, Switzerland) · 2021
    Review
  18. Review
  19. Article
  20. The New Zoonotic Malaria:Tropical medicine and infectious disease · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Erica M PasiniBiomedical Primate Research Centre, Rijswijk, Lange Kleiweg 161, 2288GJ Rijswijk, Netherlands.
Ulrike BöhmeThe Wellcome Trust Sanger Institute, Hinxton, Cambridge, CB10 1SA, UK.
Gavin G RutledgeThe Wellcome Trust Sanger Institute, Hinxton, Cambridge, CB10 1SA, UK.ORCID 0000-0003-0468-0528
Annemarie Voorberg-Van der WelBiomedical Primate Research Centre, Rijswijk, Lange Kleiweg 161, 2288GJ Rijswijk, Netherlands.
Mandy SandersThe Wellcome Trust Sanger Institute, Hinxton, Cambridge, CB10 1SA, UK.
Matt BerrimanThe Wellcome Trust Sanger Institute, Hinxton, Cambridge, CB10 1SA, UK.ORCID 0000-0002-9581-0377
Clemens Hm KockenBiomedical Primate Research Centre, Rijswijk, Lange Kleiweg 161, 2288GJ Rijswijk, Netherlands.
Thomas Dan OttoThe Wellcome Trust Sanger Institute, Hinxton, Cambridge, CB10 1SA, UK.ORCID 0000-0002-1246-7404
Wellcome Sanger Institute · GBRadboud University Nijmegen · NL

Funding

Medical Research Council MR/J004111/1Wellcome TrustWellcome Trust 098051
6 · The paper itself

Abstract

background

resultsThe new PcyM genome assembly is of significantly higher quality than the existing reference, comprising only 56 pieces, no gaps and an improved average gene length. Detailed manual curation has ensured a comprehensive annotation of the genome with 6,632 genes, nearly 1,000 more than previously attributed to

conclusionsThe manually curated PcyM reference genome sequence is an important new resource for the malaria research community. The high quality and contiguity of the data have enabled the discovery of a novel expansion of methyltransferase in the subtelomeres, and illustrates the new comparative genomics capabilities that are being unlocked by complete reference genomes.

Indexed as

methyltransferasePacBio assemblyP. coatneyiP. cynomolgi

Identifiers

PMID28748222
PMCPMC5500898
OpenAlexW2624926082

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.