Evidence map›Paper›PMID 28747667›Full record

ArticleScientific reports2017

RNA sequencing reveals resistance of TLR4 ligand-activated microglial cells to inflammation mediated by the selective jumonji H3K27 demethylase inhibitor.

Amitabh Das, Sarder Arifuzzaman, Taeho Yoon, Sun Hwa Kim, Jin Choul Chai, Young Seek Lee, Kyoung Hwa Jung, Young Gyu Chai

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
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  5. Lumateperone Normalizes Pathological Levels of Acute Inflammation through Important Pathways Known to Be Involved in Mood Regulation.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2023
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  20. Epigenetics Control Microglia Plasticity.Frontiers in cellular neuroscience · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Amitabh DasInstitute of Natural Science & Technology, Hanyang University, Ansan, 15588, Republic of Korea.
Sarder ArifuzzamanDepartment of Bionanotechnology, Hanyang University, Seoul, 04673, Republic of Korea.
Taeho YoonDepartment of Molecular & Life Sciences, Hanyang University, Ansan, 15588, Republic of Korea.
Sun Hwa KimDepartment of Molecular & Life Sciences, Hanyang University, Ansan, 15588, Republic of Korea.
Jin Choul ChaiDepartment of Molecular & Life Sciences, Hanyang University, Ansan, 15588, Republic of Korea.ORCID 0000-0001-9521-6135
Young Seek LeeDepartment of Molecular & Life Sciences, Hanyang University, Ansan, 15588, Republic of Korea.
Kyoung Hwa JungInstitute of Natural Science & Technology, Hanyang University, Ansan, 15588, Republic of Korea. khjung2@gmail.com.
Young Gyu ChaiDepartment of Bionanotechnology, Hanyang University, Seoul, 04673, Republic of Korea. ygchai@hanyang.ac.kr.
Hanyang University · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Persistent microglial activation is associated with the production and secretion of various pro-inflammatory genes, cytokines and chemokines, which may initiate or amplify neurodegenerative diseases. A novel synthetic histone 3 lysine 27 (H3K27) demethylase JMJD3 inhibitor, GSK-J4, was proven to exert immunosuppressive activities in macrophages. However, a genome-wide search for GSK-J4 molecular targets has not been undertaken in microglia. To study the immuno-modulatory effects of GSK-J4 at the transcriptomic level, triplicate RNA sequencing and quantitative real-time PCR analyses were performed with resting, GSK-J4-, LPS- and LPS + GSK-J4-challenged primary microglial (PM) and BV-2 microglial cells. Among the annotated genes, the transcriptional sequencing of microglia that were treated with GSK-J4 revealed a selective effect on LPS-induced gene expression, in which the induction of cytokines/chemokines, interferon-stimulated genes, and prominent transcription factors TFs, as well as previously unidentified genes that are important in inflammation was suppressed. Furthermore, we showed that GSK-J4 controls are important inflammatory gene targets by modulating STAT1, IRF7, and H3K27me3 levels at their promoter sites. These unprecedented results demonstrate that the histone demethylase inhibitor GSK-J4 could have therapeutic applications for neuroinflammatory diseases.

Indexed as

AnimalsBenzazepinesCells, CulturedEnzyme InhibitorsGene Expression ProfilingInflammationJumonji Domain-Containing Histone DemethylasesMiceMicrogliaPyrimidinesReal-Time Polymerase Chain ReactionSequence Analysis, RNAToll-Like Receptor 4BenzazepinesEnzyme InhibitorsGSK-J4Jumonji Domain-Containing Histone DemethylasesKdm6b protein, mousePyrimidinesTlr4 protein, mouseToll-Like Receptor 4

Identifiers

PMID28747667
PMCPMC5529413
OpenAlexW2736947938

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.