Evidence map›Paper›PMID 28746847›Full record

ArticleBiophysical journal2017

Thermodynamic Bounds on the Ultra- and Infra-affinity of Hsp70 for Its Substrates.

Basile Nguyen, David Hartich, Udo Seifert, Paolo De Los Rios

Open access · bronzeAbstract read
In one paragraph

Article in Biophysical journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
0.6field-weighted citation impact, top 35% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 16 citations in OpenAlex.

  1. Stochastic thermodynamics for biological functions.Quantitative biology (Beijing, China) · 2025
    Review
  2. Active unfolding of the glucocorticoid receptor by the Hsp70/Hsp40 chaperone system in single-molecule mechanical experiments.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Basile NguyenII. Institut für Theoretische Physik, Universität Stuttgart, Stuttgart, Germany; Laboratory of Statistical Biophysics, Institute of Physics, School of Basic Science and Institute of Bioengineering, School of Life Sciences, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland. Electronic address: nguyen@theo2.physik.uni-stuttgart.de.
David HartichII. Institut für Theoretische Physik, Universität Stuttgart, Stuttgart, Germany.
Udo SeifertII. Institut für Theoretische Physik, Universität Stuttgart, Stuttgart, Germany.
Paolo De Los RiosLaboratory of Statistical Biophysics, Institute of Physics, School of Basic Science and Institute of Bioengineering, School of Life Sciences, École Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland.
École Polytechnique Fédérale de Lausanne · CHUniversity of Stuttgart · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The 70 kDa heat shock protein Hsp70 has several essential functions in living systems, such as protecting cells against protein aggregation, assisting protein folding, remodeling protein complexes, and driving translocation into organelles. These functions require high affinity for nonspecific amino acid sequences that are ubiquitous in proteins. It has been recently shown that this high affinity, called ultra-affinity, depends on a process driven out of equilibrium by ATP hydrolysis. Here, we establish the thermodynamic bounds for ultra-affinity, and further show that the same reaction scheme can in principle be used both to strengthen and to weaken affinities (leading in this case to infra-affinity). We show that cofactors are essential to achieve affinity beyond the equilibrium range. Finally, biological implications are discussed.

Indexed as

Models, MolecularThermodynamicsAdenosine DiphosphateAdenosine TriphosphateGTP PhosphohydrolasesHSP70 Heat-Shock ProteinsHydrolysisModels, ChemicalProtein BindingProtein FoldingAdenosine DiphosphateAdenosine TriphosphateGTP PhosphohydrolasesHSP70 Heat-Shock Proteins

Identifiers

PMID28746847
PMCPMC5529314
OpenAlexW2596428317

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.