Evidence map›Paper›PMID 28746405›Full record

ArticlePloS one2017

Biophysical characterization of the calmodulin-like domain of Plasmodium falciparum calcium dependent protein kinase 3.

Cecilia Andresen, Markus Niklasson, Sofie Cassman Eklöf, Björn Wallner, Patrik Lundström

Abstract read
In one paragraph

Article in PloS one, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Proteins with calmodulin-like domains: structures and functional roles.Cellular and molecular life sciences : CMLS · 2019
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Cecilia AndresenDivision of Chemistry, Department of Physics, Chemistry and Biology, Linköping University, Linköping, Sweden.
Markus NiklassonDivision of Chemistry, Department of Physics, Chemistry and Biology, Linköping University, Linköping, Sweden.
Sofie Cassman EklöfDivision of Chemistry, Department of Physics, Chemistry and Biology, Linköping University, Linköping, Sweden.
Björn WallnerDivision of Bioinformatics, Department of Physics, Chemistry and Biology, Linköping University, Linköping, Sweden.
Patrik LundströmDivision of Chemistry, Department of Physics, Chemistry and Biology, Linköping University, Linköping, Sweden.ORCID http://orcid.org/0000-0002-4874-5381

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Calcium dependent protein kinases are unique to plants and certain parasites and comprise an N-terminal segment and a kinase domain that is regulated by a C-terminal calcium binding domain. Since the proteins are not found in man they are potential drug targets. We have characterized the calcium binding lobes of the regulatory domain of calcium dependent protein kinase 3 from the malaria parasite Plasmodium falciparum. Despite being structurally similar, the two lobes differ in several other regards. While the monomeric N-terminal lobe changes its structure in response to calcium binding and shows global dynamics on the sub-millisecond time-scale both in its apo and calcium bound states, the C-terminal lobe could not be prepared calcium-free and forms dimers in solution. If our results can be generalized to the full-length protein, they suggest that the C-terminal lobe is calcium bound even at basal levels and that activation is caused by the structural reorganization associated with binding of a single calcium ion to the N-terminal lobe.

Indexed as

Amino Acid SequenceBinding SitesBiophysical PhenomenaCalciumCalcium-Binding ProteinsCalmodulinCalorimetryCircular DichroismMagnetic Resonance SpectroscopyModels, MolecularPlasmodium falciparumProtein BindingProtein ConformationProtein FoldingProtein KinasesProtein MultimerizationCalciumCalcium-Binding ProteinsCalmodulinCDPK3 protein, Plasmodium falciparumProtein KinasesProtozoan Proteins

Identifiers

PMID28746405
PMCPMC5528832

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.