Evidence map›Paper›PMID 28745585›Full record

ArticleeLife2017

Maturation of selected human mitochondrial tRNAs requires deadenylation.

Sarah F Pearce, Joanna Rorbach, Lindsey Van Haute, Aaron R D'Souza, Pedro Rebelo-Guiomar, Christopher A Powell, Ian Brierley, Andrew E Firth, Michal Minczuk

Open access · goldAbstract read
In one paragraph

Article in eLife, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
3.9field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed, 98 citations in OpenAlex.

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  8. A roadmap for ribosome assembly in human mitochondria.Nature structural & molecular biology · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 2 countries.

Sarah F PearceMRC Mitochondrial Biology Unit, University of Cambridge, Cambridge, United Kingdom.ORCID 0000-0003-2950-7078
Joanna RorbachMRC Mitochondrial Biology Unit, University of Cambridge, Cambridge, United Kingdom.ORCID 0000-0002-2891-2840
Lindsey Van HauteMRC Mitochondrial Biology Unit, University of Cambridge, Cambridge, United Kingdom.
Aaron R D'SouzaMRC Mitochondrial Biology Unit, University of Cambridge, Cambridge, United Kingdom.ORCID 0000-0001-7169-8440
Pedro Rebelo-GuiomarMRC Mitochondrial Biology Unit, University of Cambridge, Cambridge, United Kingdom.
Christopher A PowellMRC Mitochondrial Biology Unit, University of Cambridge, Cambridge, United Kingdom.ORCID 0000-0001-7501-0586
Ian BrierleyDepartment of Pathology, University of Cambridge, Cambridge, United Kingdom.ORCID 0000-0003-3965-4370
Andrew E FirthDepartment of Pathology, University of Cambridge, Cambridge, United Kingdom.ORCID 0000-0002-7986-9520
Michal MinczukMRC Mitochondrial Biology Unit, University of Cambridge, Cambridge, United Kingdom.ORCID 0000-0001-8242-1420
University of Cambridge · GBUniversidade do Porto · PT

Funding

Medical Research Council MC_U105697135Medical Research Council MC_UU_00015/4Medical Research Council MR/M011747/1Wellcome TrustWellcome Trust 106207
6 · The paper itself

Abstract

Human mitochondria contain a genome (mtDNA) that encodes essential subunits of the oxidative phosphorylation system. Expression of mtDNA entails multi-step maturation of precursor RNA. In other systems, the RNA life cycle involves surveillance mechanisms, however, the details of RNA quality control have not been extensively characterised in human mitochondria. Using a mitochondrial ribosome profiling and mitochondrial poly(A)-tail RNA sequencing (MPAT-Seq) assay, we identify the poly(A)-specific exoribonuclease PDE12 as a major factor for the quality control of mitochondrial non-coding RNAs. The lack of PDE12 results in a spurious polyadenylation of the 3' ends of the mitochondrial (mt-) rRNA and mt-tRNA. While the aberrant adenylation of 16S mt-rRNA did not affect the integrity of the mitoribosome, spurious poly(A) additions to mt-tRNA led to reduced levels of aminoacylated pool of certain mt-tRNAs and mitoribosome stalling at the corresponding codons. Therefore, our data uncover a new, deadenylation-dependent mtRNA maturation pathway in human mitochondria.

Indexed as

PolyadenylationExoribonucleasesHEK293 CellsHumansMitochondriaMitochondrial ProteinsMitochondrial RibosomesOxidative PhosphorylationPoly ARNARNA, MessengerRNA, MitochondrialRNA, RibosomalRNA, TransferExoribonucleasesMitochondrial ProteinsPDE12 protein, humanPoly ARNARNA, MessengerRNA, MitochondrialRNA, RibosomalRNA, Transferchromosomesgeneshumanmitochondriamitochondrial RNAmitoribosomemtPAPpolyadenylationribosome profiling

Identifiers

PMID28745585
PMCPMC5544427
OpenAlexW2737481776

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.