ArticleBreeding science2017
Analysis of genetic diversity of rapeseed genetic resources in Japan and core collection construction.
Article in Breeding science, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.
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Who cites it
9 citing papers in PubMed.
- Assessment of the Genetic Diversity and Population Structure of a Wild Tea Germplasm Collection in Thailand Using SSR Markers.Plants (Basel, Switzerland) · 2026Article
- ddRAD sequencing of 1076Plant diversity · 2026Article
- Linkage disequilibrium and population structure in a core collection of Brassica napus (L.).PloS one · 2022Article
- Genetic and Flower Volatile Diversity in Natural Populations ofFrontiers in plant science · 2021Article
- Genetic diversity and population structure of feral rapeseed (Brassica napus L.) in Japan.PloS one · 2020Article
- Constructing a Core Collection of the Medicinal PlantFrontiers in plant science · 2020Article
- Root Morphological Traits of Seedlings Are Predictors of Seed Yield and Quality in Winter Oilseed Rape Hybrid Cultivars.Frontiers in plant science · 2020Article
- Construction of a core collection of eggplant (Breeding science · 2019Article
- Potential of the C Genome of the Different Variants ofFrontiers in plant science · 2019Article
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Authors and funding
4 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Diversity analysis of rapeseed accessions preserved in the Japanese Genebank can provide valuable information for breeding programs. In this study, 582 accessions were genotyped with 30 SSR markers covering all 19 rapeseed chromosomes. These markers amplified 311 alleles (10.37 alleles per marker; range, 3-39). The genetic diversity of Japanese accessions was lower than that of overseas accessions. Analysis of molecular variance indicated significant genetic differentiation between Japanese and overseas accessions. Small but significant differences were found among geographical groups in Japan, and genetic differentiation tended to increase with geographical distance. STRUCTURE analysis indicated the presence of two main genetic clusters in the NARO rapeseed collection. With the membership probabilities threshold, 227 accessions mostly originating from overseas were assigned to one subgroup, and 276 accessions mostly originating from Japan were assigned to the other subgroup. The remaining 79 accessions are assigned to admixed group. The core collection constructed comprises 96 accessions of diverse origin. It represents the whole collection well and thus it may be useful for rapeseed genetic research and breeding programs. The core collection improves the efficiency of management, evaluation, and utilization of genetic resources.
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