Evidence map›Paper›PMID 28743923›Full record

ArticleScientific reports2017

Transformation-induced changes in the DNA-nuclear matrix interface, revealed by high-throughput analysis of DNA halos.

Rosemary H C Wilson, Dawn Coverley

Abstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Rosemary H C WilsonDepartment of Biology, University of York, Heslington, York, YO10 5DD, UK. rosemary.wilson@path.ox.ac.uk.ORCID 0000-0003-3865-6729
Dawn CoverleyDepartment of Biology, University of York, Heslington, York, YO10 5DD, UK.

Funding

Biotechnology and Biological Sciences Research Council
6 · The paper itself

Abstract

In higher eukaryotic nuclei, DNA is periodically anchored to an extraction-resistant protein structure, via matrix attachment regions. We describe a refined and accessible method to non-subjectively, rapidly and reproducibly measure both size and stability of the intervening chromatin loops, and use it to demonstrate that malignant transformation compromises the DNA-nuclear matrix interface.

Indexed as

Antigens, Polyomavirus TransformingCell LineCell Line, TumorChromatinDNADNA, SuperhelicalHigh-Throughput Screening AssaysHumansImage Processing, Computer-AssistedNuclear MatrixOncogenesAntigens, Polyomavirus TransformingChromatinDNADNA, Superhelical

Identifiers

PMID28743923
PMCPMC5526987

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.