Evidence map›Paper›PMID 28741858›Full record

ArticleThe Plant journal : for cell and molecular biology2017

A computational approach for inferring the cell wall properties that govern guard cell dynamics.

Hugh C Woolfenden, Gildas Bourdais, Michaela Kopischke, Eva Miedes, Antonio Molina, Silke Robatzek, Richard J Morris

Abstract read
In one paragraph

Article in The Plant journal : for cell and molecular biology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 1 synthesis or guideline pooled it.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Hugh C WoolfendenComputational and Systems Biology, John Innes Centre, Norwich Research Park, Norwich, NR4 7UH, UK.
Gildas BourdaisThe Sainsbury Laboratory, Norwich Research Park, Norwich, NR4 7UH, UK.
Michaela KopischkeThe Sainsbury Laboratory, Norwich Research Park, Norwich, NR4 7UH, UK.
Eva MiedesCentro de Biotecnología y Genómica de Plantas (CBGP), Universidad Politécnica de Madrid (UPM), Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA), Campus de Montegancedo UPM, 28223, Pozuelo de Alarcón, Madrid, Spain.
Antonio MolinaCentro de Biotecnología y Genómica de Plantas (CBGP), Universidad Politécnica de Madrid (UPM), Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA), Campus de Montegancedo UPM, 28223, Pozuelo de Alarcón, Madrid, Spain.
Silke RobatzekThe Sainsbury Laboratory, Norwich Research Park, Norwich, NR4 7UH, UK.
Richard J MorrisComputational and Systems Biology, John Innes Centre, Norwich Research Park, Norwich, NR4 7UH, UK.ORCID http://orcid.org/0000-0003-3080-2613

Funding

Biotechnology and Biological Sciences Research Council BBS/E/J/000C0641
6 · The paper itself

Abstract

Guard cells dynamically adjust their shape in order to regulate photosynthetic gas exchange, respiration rates and defend against pathogen entry. Cell shape changes are determined by the interplay of cell wall material properties and turgor pressure. To investigate this relationship between turgor pressure, cell wall properties and cell shape, we focused on kidney-shaped stomata and developed a biomechanical model of a guard cell pair. Treating the cell wall as a composite of the pectin-rich cell wall matrix embedded with cellulose microfibrils, we show that strong, circumferentially oriented fibres are critical for opening. We find that the opening dynamics are dictated by the mechanical stress response of the cell wall matrix, and as the turgor rises, the pectinaceous matrix stiffens. We validate these predictions with stomatal opening experiments in selected Arabidopsis cell wall mutants. Thus, using a computational framework that combines a 3D biomechanical model with parameter optimization, we demonstrate how to exploit subtle shape changes to infer cell wall material properties. Our findings reveal that proper stomatal dynamics are built on two key properties of the cell wall, namely anisotropy in the form of hoop reinforcement and strain stiffening.

Indexed as

Computer SimulationArabidopsisBiomechanical PhenomenaCell WallPlant StomataVicia fabaArabidopsis thalianabiomechanicscell wallcomputational modellingguard cellsstomataVicia faba

Identifiers

PMID28741858
PMCPMC5637902

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.