Evidence map›Paper›PMID 28739903›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2017

Interdomain conformational flexibility underpins the activity of UGGT, the eukaryotic glycoprotein secretion checkpoint.

Pietro Roversi, Lucia Marti, Alessandro T Caputo, Dominic S Alonzi, Johan C Hill, Kyle C Dent, Abhinav Kumar, Mikail D Levasseur, Andrea Lia, Thomas Waksman and 12 more

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.

0numbers the graph read from it
0cells of the map it votes in
37citing papers in PubMed
3.6field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

37 citing papers in PubMed, 65 citations in OpenAlex.

  1. Article
  2. N-glycan-dependent protein maturation and quality control in the ER.Nature reviews. Molecular cell biology · 2025
    Review
  3. Article
  4. Review
  5. Insights into the interaction between UGGT, the gatekeeper of folding in the ER, and its partner, the selenoprotein SEP15.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
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  15. Review
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  19. Article
  20. TheAnnals of translational medicine · 2020
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors at 4 institutions in 2 countries.

Pietro RoversiOxford Glycobiology Institute, Department of Biochemistry, University of Oxford, Oxford OX1 3QU, United Kingdom; pietro.roversi@bioch.ox.ac.uk nicole.zitzmann@bioch.ox.ac.uk.ORCID 0000-0001-9280-9437
Lucia MartiInstitute of Sciences of Food Production, Consiglio Nazionale delle Ricerche (CNR) Unit of Lecce, I-73100 Lecce, Italy.
Alessandro T CaputoOxford Glycobiology Institute, Department of Biochemistry, University of Oxford, Oxford OX1 3QU, United Kingdom.ORCID 0000-0001-5007-6896
Dominic S AlonziOxford Glycobiology Institute, Department of Biochemistry, University of Oxford, Oxford OX1 3QU, United Kingdom.
Johan C HillOxford Glycobiology Institute, Department of Biochemistry, University of Oxford, Oxford OX1 3QU, United Kingdom.
Kyle C DentDiamond Light Source and Research Complex at Harwell, Didcot OX11 0DE, United Kingdom.
Abhinav KumarOxford Glycobiology Institute, Department of Biochemistry, University of Oxford, Oxford OX1 3QU, United Kingdom.
Mikail D LevasseurOxford Glycobiology Institute, Department of Biochemistry, University of Oxford, Oxford OX1 3QU, United Kingdom.
Andrea LiaOxford Glycobiology Institute, Department of Biochemistry, University of Oxford, Oxford OX1 3QU, United Kingdom.
Thomas WaksmanOxford Glycobiology Institute, Department of Biochemistry, University of Oxford, Oxford OX1 3QU, United Kingdom.
Souradeep BasuOxford Glycobiology Institute, Department of Biochemistry, University of Oxford, Oxford OX1 3QU, United Kingdom.
Yentli Soto AlbrechtOxford Glycobiology Institute, Department of Biochemistry, University of Oxford, Oxford OX1 3QU, United Kingdom.
Kristin QianOxford Glycobiology Institute, Department of Biochemistry, University of Oxford, Oxford OX1 3QU, United Kingdom.
James Patrick McIvorOxford Glycobiology Institute, Department of Biochemistry, University of Oxford, Oxford OX1 3QU, United Kingdom.
Colette B LippOxford Glycobiology Institute, Department of Biochemistry, University of Oxford, Oxford OX1 3QU, United Kingdom.
Dritan SiliqiIstituto di Cristallografia, Consiglio Nazionale delle Ricerche, I-70126 Bari, Italy.ORCID 0000-0003-1415-8725
Snežana VasiljevićOxford Glycobiology Institute, Department of Biochemistry, University of Oxford, Oxford OX1 3QU, United Kingdom.
Shabaz MohammedOxford Glycobiology Institute, Department of Biochemistry, University of Oxford, Oxford OX1 3QU, United Kingdom.
Petra LukacikDiamond Light Source and Research Complex at Harwell, Didcot OX11 0DE, United Kingdom.
Martin A WalshDiamond Light Source and Research Complex at Harwell, Didcot OX11 0DE, United Kingdom.ORCID 0000-0001-5683-1151
Angelo SantinoInstitute of Sciences of Food Production, Consiglio Nazionale delle Ricerche (CNR) Unit of Lecce, I-73100 Lecce, Italy.
Nicole ZitzmannOxford Glycobiology Institute, Department of Biochemistry, University of Oxford, Oxford OX1 3QU, United Kingdom; pietro.roversi@bioch.ox.ac.uk nicole.zitzmann@bioch.ox.ac.uk.
University of Oxford · GBDiamond Light Source · GBInstitute of Sciences of Food Production · ITInstitute of Crystallography · IT

Funding

Wellcome TrustWellcome Trust 097300/Z/11/ZWellcome Trust 106272/Z/14/Z
6 · The paper itself

Abstract

Glycoproteins traversing the eukaryotic secretory pathway begin life in the endoplasmic reticulum (ER), where their folding is surveyed by the 170-kDa UDP-glucose:glycoprotein glucosyltransferase (UGGT). The enzyme acts as the single glycoprotein folding quality control checkpoint: it selectively reglucosylates misfolded glycoproteins, promotes their association with ER lectins and associated chaperones, and prevents premature secretion from the ER. UGGT has long resisted structural determination and sequence-based domain boundary prediction. Questions remain on how this single enzyme can flag misfolded glycoproteins of different sizes and shapes for ER retention and how it can span variable distances between the site of misfold and a glucose-accepting N-linked glycan on the same glycoprotein. Here, crystal structures of a full-length eukaryotic UGGT reveal four thioredoxin-like (TRXL) domains arranged in a long arc that terminates in two β-sandwiches tightly clasping the glucosyltransferase domain. The fold of the molecule is topologically complex, with the first β-sandwich and the fourth TRXL domain being encoded by nonconsecutive stretches of sequence. In addition to the crystal structures, a 15-Å cryo-EM reconstruction reveals interdomain flexibility of the TRXL domains. Double cysteine point mutants that engineer extra interdomain disulfide bridges rigidify the UGGT structure and exhibit impaired activity. The intrinsic flexibility of the TRXL domains of UGGT may therefore endow the enzyme with the promiscuity needed to recognize and reglucosylate its many different substrates and/or enable reglucosylation of N-linked glycans situated at variable distances from the site of misfold.

Indexed as

AnimalsChaetomiumCrystallography, X-RayEndoplasmic ReticulumEukaryotaEukaryotic CellsGlucosyltransferasesGlycoproteinsMolecular ConformationProtein DomainsProtein FoldingProtein TransportSubstrate SpecificityGlucosyltransferasesGlycoproteinsmannosylglycoprotein 1,3-glucosyltransferaseendoplasmic reticulumeukaryotic secretionglycoprotein foldingUDP-glucose glycoprotein glucosyltransferaseUGGT

Identifiers

PMID28739903
PMCPMC5559018
OpenAlexW2739115781

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.