Evidence map›Paper›PMID 28739660›Full record

ArticleGenetics2017

A Gene Implicated in Activation of Retinoic Acid Receptor Targets Is a Novel Renal Agenesis Gene in Humans.

Patrick D Brophy, Maria Rasmussen, Mrutyunjaya Parida, Greg Bonde, Benjamin W Darbro, Xiaojing Hong, Jason C Clarke, Kevin A Peterson, James Denegre, Michael Schneider and 7 more

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed, 92 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Case report of a novelJournal of otology · 2025
    Article
  8. Article
  9. Article
  10. Bilateral renal agenesis: fetal intervention and outcomes.Pediatric nephrology (Berlin, Germany) · 2025
    Review
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Review
  17. Article
  18. Epithelial and mesenchymal fate decisions in Wolffian duct development.Trends in endocrinology and metabolism: TEM · 2023
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 6 institutions in 2 countries.

Patrick D BrophyDepartment of Pediatrics, University of Iowa, Iowa City, Iowa 52242.
Maria RasmussenDepartment of Clinical Genetics, Aarhus University Hospital, Skejby, Denmark 8200.
Mrutyunjaya ParidaDepartment of Biology, University of Iowa, Iowa City, Iowa 52242.
Greg BondeDepartment of Anatomy and Cell Biology, University of Iowa, Iowa City, Iowa 52242.
Benjamin W DarbroDepartment of Pediatrics, University of Iowa, Iowa City, Iowa 52242.
Xiaojing HongDepartment of Biology, University of Iowa, Iowa City, Iowa 52242.
Jason C ClarkeDepartment of Pediatrics, University of Iowa, Iowa City, Iowa 52242.
Kevin A PetersonGenetics and Genomics, The Jackson Laboratory, Bar Harbor, Maine 04609.
James DenegreGenetics and Genomics, The Jackson Laboratory, Bar Harbor, Maine 04609.
Michael SchneiderMedical Genetics, Carle Foundation Hospital and Physician Group, Urbana, Illinois 61801.
Caroline R SussmanDepartment of Nephrology and Hypertension, Mayo Clinic, Rochester, Minnesota 55905.
Lone SundeDepartment of Clinical Genetics, Aarhus University Hospital, Skejby, Denmark 8200.
Dorte L LildballeDepartment of Clinical Genetics, Aarhus University Hospital, Skejby, Denmark 8200.
Jens Michael HertzDepartment of Clinical Genetics, Odense University Hospital, Odense, Denmark 5000.
Robert A CornellDepartment of Anatomy and Cell Biology, University of Iowa, Iowa City, Iowa 52242.
Stephen A MurrayGenetics and Genomics, The Jackson Laboratory, Bar Harbor, Maine 04609.
J Robert ManakDepartment of Pediatrics, University of Iowa, Iowa City, Iowa 52242.
University of Iowa · USJackson Laboratory · USAarhus University Hospital · DKCarle Foundation Hospital · USMayo Clinic · USOdense University Hospital · DK

Funding

Viral VectorP30CA086862 · NCI · UNIVERSITY OF IOWA · PI Douglas Robert Spitz · 2000 to 2026
$70.0M
The Jackson Laboratory Knockout Mouse Production and Phenotyping Project (JAX KOMP2)UM1OD023222 · OD · JACKSON LABORATORY · PI ROBERT E BRAUN, Stephen A Murray · 2016 to 2026
$47.2M
Pilot and FeasibilityP30DK090728 · NIDDK · MAYO CLINIC ROCHESTER · PI ROMERO, MICHAEL F. · 2010 to 2019
$11.8M
Genomic identification of copy number variants to identify clefting lociR01DE021071 · NIDCR · UNIVERSITY OF IOWA · PI MANAK, JOHN ROBERT · 2010 to 2014
$3.5M
Genetic Variations and Development of Vesicoureteral Reflux and SequelaeRC4DK090937 · NIDDK · RESEARCH INST NATIONWIDE CHILDREN'S HOSP · PI HAINS, DAVID SULLIVAN, SCHWADERER, ANDREW LAWRENCE · 2010 to 2010
$1.5M
NIDCR NIH HHS R01 DE021071NIDDK NIH HHS P30 DK090728NIDDK NIH HHS RC4 DK090937NIH HHS UM1 OD023222
6 · The paper itself

Abstract

Renal agenesis (RA) is one of the more extreme examples of congenital anomalies of the kidney and urinary tract (CAKUT). Bilateral renal agenesis is almost invariably fatal at birth, and unilateral renal agenesis can lead to future health issues including end-stage renal disease. Genetic investigations have identified several gene variants that cause RA, including

Indexed as

AnimalsCongenital AbnormalitiesExomeFemaleHumansKidneyKidney DiseasesLoss of Function MutationMaleMembrane ProteinsMiceNeoplasm ProteinsPedigreeProteinsReceptors, Retinoic AcidZebrafishGREB1 protein, humangreb1 protein, zebrafishKIAA0575 protein, mouseMembrane ProteinsNeoplasm ProteinsProteinsReceptors, Retinoic AcidZebrafish ProteinsCAKUTGREB1Lrenal agenesisretinoic acidwhole exome sequencing

Identifiers

PMID28739660
PMCPMC5586373
OpenAlexW2736407968

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.