Evidence map›Paper›PMID 28739600›Full record

ArticleG3 (Bethesda, Md.)2017

Whole-Genome Sequencing and Concordance Between Antimicrobial Susceptibility Genotypes and Phenotypes of Bacterial Isolates Associated with Bovine Respiratory Disease.

Joseph R Owen, Noelle Noyes, Amy E Young, Daniel J Prince, Patricia C Blanchard, Terry W Lehenbauer, Sharif S Aly, Jessica H Davis, Sean M O'Rourke, Zaid Abdo and 4 more

Open access · goldAbstract read
In one paragraph

Article in G3 (Bethesda, Md.), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
1.6field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 44 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Article
  15. Laboratory tools for the direct detection of bacterial respiratory infections and antimicrobial resistance: a scoping review.Journal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc · 2024
    Article
  16. Article
  17. Article
  18. Article
  19. Antimicrobial Susceptibility and Resistance Mechanisms inAnimals : an open access journal from MDPI · 2023
    Article
  20. A neglected and emerging antimicrobial resistance gene encodes for a serine-dependent macrolide esterase.Proceedings of the National Academy of Sciences of the United States of America · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Joseph R OwenDepartment of Animal Science, University of California, Davis, California 95616.ORCID 0000-0001-7821-3012
Noelle NoyesDepartment of Microbiology, Immunology, and Pathology, College of Veterinary Medicine and Biomedical Sciences, Colorado State University, Fort Collins, Colorado 80523.ORCID 0000-0001-6149-1008
Amy E YoungDepartment of Animal Science, University of California, Davis, California 95616.ORCID 0000-0002-4181-4233
Daniel J PrinceDepartment of Animal Science, University of California, Davis, California 95616.
Patricia C BlanchardCalifornia Animal Health and Food Safety Laboratory, School of Veterinary Medicine, University of California, Davis, Tulare, California 93274.
Terry W LehenbauerVeterinary Medicine Teaching and Research Center, School of Veterinary Medicine, University of California, Davis, Tulare, California 93274.
Sharif S AlyVeterinary Medicine Teaching and Research Center, School of Veterinary Medicine, University of California, Davis, Tulare, California 93274.ORCID 0000-0003-0330-5013
Jessica H DavisVeterinary Medicine Teaching and Research Center, School of Veterinary Medicine, University of California, Davis, Tulare, California 93274.
Sean M O'RourkeDepartment of Animal Science, University of California, Davis, California 95616.
Zaid AbdoDepartment of Microbiology, Immunology, and Pathology, College of Veterinary Medicine and Biomedical Sciences, Colorado State University, Fort Collins, Colorado 80523.
Keith BelkDepartment of Animal Sciences, College of Agricultural Sciences, Colorado State University, Fort Collins, Colorado 80523.
Michael R MillerDepartment of Animal Science, University of California, Davis, California 95616.
Paul MorleyDepartment of Clinical Sciences, College of Veterinary Medicine and Biomedical Sciences, Colorado State University, Fort Collins, Colorado 80523.ORCID 0000-0001-8138-2714
Alison L Van EenennaamDepartment of Animal Science, University of California, Davis, California 95616 alvaneenennaam@ucdavis.edu.ORCID 0000-0003-1562-162X
University of California, Davis · USColorado State University · US

Funding

Veterinary Pre-Doctoral Research Scholars ProgramT32OD012201 · OD · COLORADO STATE UNIVERSITY · PI VANDEWOUDE, SUE · 2013 to 2019
$795k
NIH HHS T32 OD012201
6 · The paper itself

Abstract

Extended laboratory culture and antimicrobial susceptibility testing timelines hinder rapid species identification and susceptibility profiling of bacterial pathogens associated with bovine respiratory disease, the most prevalent cause of cattle mortality in the United States. Whole-genome sequencing offers a culture-independent alternative to current bacterial identification methods, but requires a library of bacterial reference genomes for comparison. To contribute new bacterial genome assemblies and evaluate genetic diversity and variation in antimicrobial resistance genotypes, whole-genome sequencing was performed on bovine respiratory disease-associated bacterial isolates (

Indexed as

Genome, BacterialGenotypePhenotypeAnimalsAnti-Infective AgentsBacteriaBacterial InfectionsCattleCattle DiseasesChromosome MappingDrug Resistance, BacterialGenetic Association StudiesGenetic VariationGenomicsMicrobial Sensitivity TestsPhylogenyAnti-Infective AgentsHistophilus somniMannheimia haemolyticaMycoplasma bovisPasteurella multocida

Identifiers

PMID28739600
PMCPMC5592931
OpenAlexW2737187865

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.