Evidence map›Paper›PMID 28734477›Full record

ArticleBiophysical journal2017

Polarity-Sensitive Probes for Superresolution Stimulated Emission Depletion Microscopy.

Erdinc Sezgin, Falk Schneider, Victoria Zilles, Iztok Urbančič, Esther Garcia, Dominic Waithe, Andrey S Klymchenko, Christian Eggeling

Open access · hybridAbstract read
In one paragraph

Article in Biophysical journal, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
3.7field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 73 citations in OpenAlex.

  1. Article
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  7. Super-Resolution Imaging Reveals Dynamic Reticular Cytoophidia.International journal of molecular sciences · 2022
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  18. Membrane Heterogeneity Beyond the Plasma Membrane.Frontiers in cell and developmental biology · 2020
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Erdinc SezginMRC Human Immunology UnitWeatherall Institute of Molecular Medicine, University of Oxford, Oxford, United Kingdom.
Falk SchneiderMRC Human Immunology UnitWeatherall Institute of Molecular Medicine, University of Oxford, Oxford, United Kingdom.
Victoria ZillesMRC Human Immunology UnitWeatherall Institute of Molecular Medicine, University of Oxford, Oxford, United Kingdom.
Iztok UrbančičMRC Human Immunology UnitWeatherall Institute of Molecular Medicine, University of Oxford, Oxford, United Kingdom.
Esther GarciaMRC Human Immunology UnitWeatherall Institute of Molecular Medicine, University of Oxford, Oxford, United Kingdom.
Dominic WaitheWolfson Imaging Centre Oxford, Weatherall Institute of Molecular Medicine, University of Oxford, Oxford, United Kingdom.
Andrey S KlymchenkoCNRS UMR 7213, Laboratoire de Biophotonique et Pharmacologie, University of Strasbourg, Illkirch Cedex, France.
Christian EggelingMRC Human Immunology UnitWeatherall Institute of Molecular Medicine, University of Oxford, Oxford, United Kingdom; Wolfson Imaging Centre Oxford, Weatherall Institute of Molecular Medicine, University of Oxford, Oxford, United Kingdom. Electronic address: christian.eggeling@rdm.ox.ac.uk.
University of Oxford · GBMRC Human Immunology Unit · GBLaboratoire de Biophotonique et Pharmacologie · FR

Funding

Medical Research Council G0902418Medical Research Council MC_UU_00008/9Medical Research Council MC_UU_12010/9Medical Research Council MR/K01577X/1Wellcome Trust
6 · The paper itself

Abstract

The lateral organization of molecules in the cellular plasma membrane plays an important role in cellular signaling. A critical parameter for membrane molecular organization is how the membrane lipids are packed. Polarity-sensitive dyes are powerful tools to characterize such lipid membrane order, employing, for example, confocal and two-photon microscopy. The investigation of potential nanodomains, however, requires the use of superresolution microscopy. Here, we test the performance of the polarity-sensitive membrane dyes Di-4-ANEPPDHQ, Di-4-AN(F)EPPTEA, and NR12S in superresolution stimulated emission depletion microscopy. Measurements on cell-derived membrane vesicles, in the plasma membrane of live cells, and on single virus particles, show the high potential of these dyes for probing nanoscale membrane heterogeneity.

Indexed as

BenzoxazinesFluorescent DyesMicroscopyPyridinium CompoundsQuaternary Ammonium CompoundsVoltage-Sensitive Dye ImagingAnimalsCell MembraneCHO CellsCricetulusCytoplasmic VesiclesHEK293 CellsHIVHumansMolecular StructurePhosphatidylethanolamines1,2-dipalmitoyl-3-phosphatidylethanolamineBenzoxazinesdi-4-ANEPPDHQdi-4-AN(F)EPPTEAFluorescent DyesNR12S compoundPhosphatidylethanolaminesPyridinium CompoundsQuaternary Ammonium Compounds

Identifiers

PMID28734477
PMCPMC5607142
OpenAlexW2737313379

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.