Evidence map›Paper›PMID 28733590›Full record

ArticleScientific reports2017

Hypersaline sapropels act as hotspots for microbial dark matter.

Adrian-Ştefan Andrei, Andreea Baricz, Michael Scott Robeson, Manuela Raluca Păuşan, Tudor Tămaş, Cecilia Chiriac, Edina Szekeres, Lucian Barbu-Tudoran, Erika Andrea Levei, Cristian Coman and 2 more

Abstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed.

  1. Article
  2. Review
  3. Microbial Composition Dynamics in Peloids Used for Spa Procedures in Lithuania: Pilot Study.International journal of environmental research and public health · 2024
    Article
  4. Article
  5. Article
  6. Article
  7. Asgard archaea in saline environments.Extremophiles : life under extreme conditions · 2022
    Review
  8. Article
  9. Article
  10. Article
  11. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Adrian-Ştefan AndreiDepartment of Molecular Biology and Biotechnology, Faculty of Biology and Geology, Babeş-Bolyai University, Cluj-Napoca, Romania. stefan.andrei@ubbcluj.ro.ORCID 0000-0003-1425-7168
Andreea BariczNational Institute of Research and Development for Biological Sciences (NIRDBS), Institute of Biological Research, Cluj-Napoca, Romania.
Michael Scott RobesonBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA.ORCID 0000-0001-7119-6301
Manuela Raluca PăuşanDepartment for Internal Medicine, Medical University of Graz, Graz, Austria.
Tudor TămaşDepartment of Geology, Faculty of Biology and Geology, Babeş-Bolyai University, Cluj-Napoca, Romania.
Cecilia ChiriacDepartment of Molecular Biology and Biotechnology, Faculty of Biology and Geology, Babeş-Bolyai University, Cluj-Napoca, Romania.
Edina SzekeresDepartment of Molecular Biology and Biotechnology, Faculty of Biology and Geology, Babeş-Bolyai University, Cluj-Napoca, Romania.
Lucian Barbu-TudoranDepartment of Molecular Biology and Biotechnology, Faculty of Biology and Geology, Babeş-Bolyai University, Cluj-Napoca, Romania.
Erika Andrea LeveiINCDO-INOE 2000, Research Institute for Analytical Instrumentation, Cluj-Napoca, Romania.
Cristian ComanNational Institute of Research and Development for Biological Sciences (NIRDBS), Institute of Biological Research, Cluj-Napoca, Romania.
Mircea PodarBiosciences Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee, USA.
Horia Leonard BanciuDepartment of Molecular Biology and Biotechnology, Faculty of Biology and Geology, Babeş-Bolyai University, Cluj-Napoca, Romania. horia.banciu@ubbcluj.ro.ORCID 0000-0002-6563-3226

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Present-day terrestrial analogue sites are crucial ground truth proxies for studying life in geochemical conditions close to those assumed to be present on early Earth or inferred to exist on other celestial bodies (e.g. Mars, Europa). Although hypersaline sapropels are border-of-life habitats with moderate occurrence, their microbiological and physicochemical characterization lags behind. Here, we study the diversity of life under low water activity by describing the prokaryotic communities from two disparate hypersaline sapropels (Transylvanian Basin, Romania) in relation to geochemical milieu and pore water chemistry, while inferring their role in carbon cycling by matching taxa to known taxon-specific biogeochemical functions. The polyphasic approach combined deep coverage SSU rRNA gene amplicon sequencing and bioinformatics with RT-qPCR and physicochemical investigations. We found that sapropels developed an analogous elemental milieu and harbored prokaryotes affiliated with fifty-nine phyla, among which the most abundant were Proteobacteria, Bacteroidetes and Chloroflexi. Containing thirty-two candidate divisions and possibly undocumented prokaryotic lineages, the hypersaline sapropels were found to accommodate one of the most diverse and novel ecosystems reported to date and may contribute to completing the phylogenetic branching of the tree of life.

Indexed as

ArchaeaBacteroidetesBenzopyransChloroflexiDNA, BacterialDNA, RibosomalGeologic SedimentsHumic SubstancesLakesPhylogenyProteobacteriaRomaniaSequence Analysis, DNABenzopyransDNA, BacterialDNA, RibosomalHumic Substancessapropel

Identifiers

PMID28733590
PMCPMC5522462

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.