Evidence map›Paper›PMID 28732051›Full record

ArticlePLoS pathogens2017

CD4 is expressed on a heterogeneous subset of hematopoietic progenitors, which persistently harbor CXCR4 and CCR5-tropic HIV proviral genomes in vivo.

Nadia T Sebastian, Thomas D Zaikos, Valeri Terry, Frances Taschuk, Lucy A McNamara, Adewunmi Onafuwa-Nuga, Ryan Yucha, Robert A J Signer, James Riddell, Dale Bixby and 3 more

Erratum issuedAbstract read
In one paragraph

Article in PLoS pathogens, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Hematopoietic Stem and Progenitor Cells (HSPCs).Methods in molecular biology (Clifton, N.J.) · 2022
    Article
  12. Molecular Biology and Diversification of Human Retroviruses.Frontiers in virology (Lausanne, Switzerland) · 2022
    Article
  13. The CCR5 Gene Edited CD34Frontiers in immunology · 2022
    Article
  14. HIV-1Biology direct · 2021
    Article
  15. Review
  16. Review
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors.

Nadia T SebastianProgram in Cellular and Molecular Biology, University of Michigan, Ann Arbor, Michigan, United States of America.ORCID 0000-0002-1115-6188
Thomas D ZaikosDepartment of Microbiology and Immunology University of Michigan, Ann Arbor, Michigan, United States of America.
Valeri TerryDivision of Infectious Disease, Department of Internal Medicine University of Michigan, Ann Arbor, Michigan, United States of America.ORCID 0000-0002-2499-3882
Frances TaschukDivision of Infectious Disease, Department of Internal Medicine University of Michigan, Ann Arbor, Michigan, United States of America.ORCID 0000-0003-2299-2605
Lucy A McNamaraDepartment of Microbiology and Immunology University of Michigan, Ann Arbor, Michigan, United States of America.
Adewunmi Onafuwa-NugaDivision of Infectious Disease, Department of Internal Medicine University of Michigan, Ann Arbor, Michigan, United States of America.
Ryan YuchaDivision of Infectious Disease, Department of Internal Medicine University of Michigan, Ann Arbor, Michigan, United States of America.ORCID 0000-0002-5851-3445
Robert A J SignerHoward Hughes Medical Institute, University of Texas Southwestern Medical Center, Dallas, Texas, United States of America.ORCID 0000-0003-3286-1334
James RiddellDivision of Infectious Disease, Department of Internal Medicine University of Michigan, Ann Arbor, Michigan, United States of America.
Dale BixbyDivision of Oncology, Department of Internal Medicine, University of Michigan, Ann Arbor, Michigan, United States of America.ORCID 0000-0001-6885-8239
Norman MarkowitzDivision of Infectious Diseases, Henry Ford Hospital, Detroit, Michigan, United States of America.ORCID 0000-0001-6886-0400
Sean J MorrisonHoward Hughes Medical Institute, University of Texas Southwestern Medical Center, Dallas, Texas, United States of America.
Kathleen L CollinsProgram in Cellular and Molecular Biology, University of Michigan, Ann Arbor, Michigan, United States of America.ORCID 0000-0002-1712-5809

Funding

XenograftP30CA046592 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI THEODORE S LAWRENCE · 1988 to 2026
$178.2M
MICHIGAN INSTITUTE FOR CLINICAL AND HEALTH RESEARCH (MICHR) (UL1): (BPCA)UL1RR024986 · NCRR · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI SHANLEY, THOMAS P. · 2007 to 2011
$51.2M
Michigan Institute for Clinical and Health Research (MCHR)UL1TR000433 · NCATS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI MASHOUR, GEORGE ALEXANDER · 2012 to 2016
$49.9M
MICHIGAN MEDICAL SCIENTIST TRAINING PROGRAMT32GM007863 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI COLLINS, KATHLEEN L. · 1985 to 2024
$38.3M
CELLULAR AND MOLECULAR BIOLOGY AT MICHIGANT32GM007315 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI PUTHENVEEDU, MANOJKUMAR A · 1985 to 2021
$12.8M
HIV Infection of Hematopoietic Progenitor CellsR01AI096962 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI COLLINS, KATHLEEN L. · 2012 to 2016
$2.9M
NCATS NIH HHS UL1 TR000433NCI NIH HHS P30 CA046592NCRR NIH HHS UL1 RR024986NIAID NIH HHS R01 AI096962NIGMS NIH HHS T32 GM007315NIGMS NIH HHS T32 GM007863
6 · The paper itself

Abstract

Latent HIV infection of long-lived cells is a barrier to viral clearance. Hematopoietic stem and progenitor cells are a heterogeneous population of cells, some of which are long-lived. CXCR4-tropic HIVs infect a broad range of HSPC subtypes, including hematopoietic stem cells, which are multi-potent and long-lived. However, CCR5-tropic HIV infection is limited to more differentiated progenitor cells with life spans that are less well understood. Consistent with emerging data that restricted progenitor cells can be long-lived, we detected persistent HIV in restricted HSPC populations from optimally treated people. Further, genotypic and phenotypic analysis of amplified env alleles from donor samples indicated that both CXCR4- and CCR5-tropic viruses persisted in HSPCs. RNA profiling confirmed expression of HIV receptor RNA in a pattern that was consistent with in vitro and in vivo results. In addition, we characterized a CD4high HSPC sub-population that was preferentially targeted by a variety of CXCR4- and CCR5-tropic HIVs in vitro. Finally, we present strong evidence that HIV proviral genomes of both tropisms can be transmitted to CD4-negative daughter cells of multiple lineages in vivo. In some cases, the transmitted proviral genomes contained signature deletions that inactivated the virus, eliminating the possibility that coincidental infection explains the results. These data support a model in which both stem and non-stem cell progenitors serve as persistent reservoirs for CXCR4- and CCR5-tropic HIV proviral genomes that can be passed to daughter cells.

Indexed as

AdultCD4 AntigensCells, CulturedFemaleGenome, ViralHematopoietic Stem CellsHIV-1HIV InfectionsHumansMaleProvirusesReceptors, CCR5Receptors, CXCR4Receptors, HIVYoung AdultCD4 AntigensCXCR4 protein, humanReceptors, CCR5Receptors, CXCR4Receptors, HIV

Identifiers

PMID28732051
PMCPMC5540617

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.