Evidence map›Paper›PMID 28731447›Full record

ArticleJournal of Alzheimer's disease : JAD2017

Chromatin-Bound Oxidized α-Synuclein Causes Strand Breaks in Neuronal Genomes in in vitro Models of Parkinson's Disease.

Velmarini Vasquez, Joy Mitra, Pavana M Hegde, Arvind Pandey, Shiladitya Sengupta, Sankar Mitra, K S Rao, Muralidhar L Hegde

Open access · greenAbstract read
In one paragraph

Article in Journal of Alzheimer's disease : JAD, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 54 papers.

0numbers the graph read from it
0cells of the map it votes in
54citing papers in PubMed
4.4field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

54 citing papers in PubMed, 93 citations in OpenAlex.

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  8. Biological Amyloids Chemically Damage DNA.ACS chemical neuroscience · 2025
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  19. DNA Damage-Mediated Neurotoxicity in Parkinson's Disease.International journal of molecular sciences · 2023
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 3 countries.

Velmarini VasquezDepartment of Radiation Oncology, Houston Methodist Research Institute, Houston, TX, USA.
Joy MitraDepartment of Radiation Oncology, Houston Methodist Research Institute, Houston, TX, USA.
Pavana M HegdeDepartment of Radiation Oncology, Houston Methodist Research Institute, Houston, TX, USA.
Arvind PandeyDepartment of Radiation Oncology, Houston Methodist Research Institute, Houston, TX, USA.
Shiladitya SenguptaDepartment of Radiation Oncology, Houston Methodist Research Institute, Houston, TX, USA.
Sankar MitraDepartment of Radiation Oncology, Houston Methodist Research Institute, Houston, TX, USA.
K S RaoCentre for Neuroscience, Instituto de Investigaciones Científicas y Servicios de Alta Tecnología, City of Knowledge, Republic of Panama.
Muralidhar L HegdeDepartment of Radiation Oncology, Houston Methodist Research Institute, Houston, TX, USA.
Houston Methodist · USCornell University · USInstituto de Investigaciones Científicas y Servicios de Alta Tecnología · PAMethodist Hospital · US

Funding

Etiological Linkage of DNA Damage/Repair Deficiency in Neurodegenerative DiseasesR01NS088645 · NINDS · METHODIST HOSPITAL RESEARCH INSTITUTE · PI HEGDE, MURALIDHAR L · 2015 to 2019
$1.8M
Repair of Oxidative Genome Damage Associated with Gene ActivationR01GM105090 · NIGMS · METHODIST HOSPITAL RESEARCH INSTITUTE · PI MITRA, SANKAR · 2014 to 2017
$1.2M
NIGMS NIH HHS R01 GM105090NINDS NIH HHS R01 NS088645
6 · The paper itself

Abstract

Alpha-synuclein (α-Syn) overexpression and misfolding/aggregation in degenerating dopaminergic neurons have long been implicated in Parkinson's disease (PD). The neurotoxicity of α-Syn is enhanced by iron (Fe) and other pro-oxidant metals, leading to generation of reactive oxygen species in PD brain. Although α-Syn is predominantly localized in presynaptic nerve terminals, a small fraction exists in neuronal nuclei. However, the functional and/or pathological role of nuclear α-Syn is unclear. Following up on our earlier report that α-Syn directly binds DNA in vitro, here we confirm the nuclear localization and chromatin association of α-Syn in neurons using proximity ligation and chromatin immunoprecipitation analysis. Moderate (∼2-fold) increase in α-Syn expression in neural lineage progenitor cells (NPC) derived from induced pluripotent human stem cells (iPSCs) or differentiated SHSY-5Y cells caused DNA strand breaks in the nuclear genome, which was further enhanced synergistically by Fe salts. Furthermore, α-Syn required nuclear localization for inducing genome damage as revealed by the effect of nucleus versus cytosol-specific mutants. Enhanced DNA damage by oxidized and misfolded/oligomeric α-Syn suggests that DNA nicking activity is mediated by the chemical nuclease activity of an oxidized peptide segment in the misfolded α-Syn. Consistent with this finding, a marked increase in Fe-dependent DNA breaks was observed in NPCs from a PD patient-derived iPSC line harboring triplication of the SNCA gene. Finally, α-Syn combined with Fe significantly promoted neuronal cell death. Together, these findings provide a novel molecular insight into the direct role of α-Syn in inducing neuronal genome damage, which could possibly contribute to neurodegeneration in PD.

Indexed as

DNA Breaks, Double-Strandedalpha-SynucleinAnnexin A5Cell DeathCell Line, TumorCell NucleolusChromatinComet AssayCopper SulfateDNA DamageGene Expression RegulationHumansIronNestinNeural Stem CellsNeuroblastomaalpha-SynucleinAnnexin A5ChromatinCopper SulfategreigiteIronNestinReactive Oxygen SpeciesSulfidesAlpha-synucleiniPSC-derived neural progenitor cellsironneurodegenerationParkinson’s disease

Identifiers

PMID28731447
PMCPMC6172953
OpenAlexW2739097448

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.