ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2017
Genome-wide association mapping of canopy wilting in diverse soybean genotypes.
Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.
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Who cites it
50 citing papers in PubMed.
- Association mapping for canopy temperature under irrigated and rainfed conditions at 12 environments identified both known and novel genetic loci.The plant genome · 2026Article
- Genetic dissection of oil content in maize kernel using combined genome-wide association analysis and linkage mapping.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- Integrative multi-trait phenotyping reveals coordinated root and antioxidant responses underlying drought tolerance in soybean.BMC plant biology · 2026Article
- YOLO-based high-throughput phenotyping pipeline for soybean nodulation traits in genomic research.Frontiers in plant science · 2026Article
- Drought tolerance in soybean: genetics, metabolomics, remote sensing, and breeding for enhanced drought tolerance.Frontiers in plant science · 2026Review
- Genome-wide association study on soybean canopy wilting under drought stress conditions in a rainout-shelter greenhouse.Frontiers in plant science · 2026Article
- Dissecting the genetic basis underlying drought tolerance at different development stages in soybean.Frontiers in plant science · 2026Article
- EasyGeSe - a resource for benchmarking genomic prediction methods.BMC genomics · 2025Article
- Identifying canopy wilting QTLs and evaluating remote sensing approaches for selecting drought-tolerant soybean.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025Article
- Development of an automated phenotyping platform and identification of a novel QTL for drought tolerance in soybean.Plant phenomics (Washington, D.C.) · 2025Article
- A wild-allele GsPP2C-51-a1 enhances tolerance to drought stress in soybean and Arabidopsis.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2025Article
- Seed yield and nutrition in slow-wilting soybean breeding lines as influenced by irrigated and non-irrigated conditions in the Midsouth USA.Frontiers in plant science · 2025Article
- Deep short-read sequences facilitated identification of seven putative drought tolerance genes in a genome-wide association study in soybean.Frontiers in plant science · 2025Article
- Genome-Wide Association Analysis of Boar Semen Traits Based on Computer-Assisted Semen Analysis and Flow Cytometry.Animals : an open access journal from MDPI · 2024Article
- Characterization of genetic diversity and identification of genetic loci associated with carbon allocation in NBMC genomics · 2024Article
- Multi-sensor and multi-temporal high-throughput phenotyping for monitoring and early detection of water-limiting stress in soybean.Plant phenome journal · 2024Article
- Article
- Genetic Control of Tolerance to Drought Stress in Wild Soybean (Plants (Basel, Switzerland) · 2024Article
- Combining genome-wide association study and linkage mapping in the genetic dissection of amylose content in maize (Zea mays L.).TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024Article
- Genetic mapping reveals the complex genetic architecture controlling slow canopy wilting in soybean.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024Article
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Authors and funding
5 authors.
Funding
Abstract
key messageGenome-wide association analysis identified 61 SNP markers for canopy wilting, which likely tagged 51 different loci. Based on the allelic effects of the significant SNPs, the slowest and fastest wilting genotypes were identified. Drought stress is a major global constraint for crop production, and slow canopy wilting is a promising trait for improving drought tolerance. The objective of this study was to identify genetic loci associated with canopy wilting and to confirm those loci with previously reported canopy wilting QTLs. A panel of 373 maturity group (MG) IV soybean genotypes was grown in four environments to evaluate canopy wilting. Statistical analysis of phenotype indicated wide variation for the trait, with significant effects of genotype (G), environment (E), and G × E interaction. Over 42,000 SNP markers were obtained from the Illumina Infinium SoySNP50K iSelect SNP Beadchip. After filtration for quality control, 31,260 SNPs with a minor allele frequency (MAF) ≥5% were used for association mapping using the Fixed and random model Circulating Probability Unification (FarmCPU) model. There were 61 environment-specific significant SNP-canopy wilting associations, and 21 SNPs that associated with canopy wilting in more than one environment. There were 34 significant SNPs associated with canopy wilting when averaged across environments. Together, these SNPs tagged 23 putative loci associated with canopy wilting. Six of the putative loci were located within previously reported chromosomal regions that were associated with canopy wilting through bi-parental mapping. Several significant SNPs were located within a gene or very close to genes that had a reported biological connection to transpiration or water transport. Favorable alleles from significant SNPs may be an important resource for pyramiding genes to improve drought tolerance and for identifying parental genotypes for use in breeding programs.
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