Evidence map›Paper›PMID 28730284›Full record

ArticleJournal of cancer research and clinical oncology2017

A novel interplay between HOTAIR and DNA methylation in osteosarcoma cells indicates a new therapeutic strategy.

Xingang Li, Hongming Lu, Guilian Fan, Miao He, Yu Sun, Kai Xu, Fengjun Shi

Open access · greenAbstract read
In one paragraph

Article in Journal of cancer research and clinical oncology, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 25 papers.

0numbers the graph read from it
0cells of the map it votes in
25citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

25 citing papers in PubMed, 37 citations in OpenAlex.

  1. Review
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  3. Review
  4. Article
  5. Navigating the genomic instability mine field of osteosarcoma to better understand implications of non-coding RNAs.Biocell : official journal of the Sociedades Latinoamericanas de Microscopia Electronica ... et. al · 2022
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  6. Article
  7. Review
  8. Review
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  11. Novel application of single-cell next-generation sequencing for determination of intratumoral heterogeneity of canine osteosarcoma cell lines.Journal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc · 2021
    Article
  12. Article
  13. Review
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  15. Review
  16. Multifaceted Functions and Novel Insight Into the Regulatory Role of RNA NFrontiers in cell and developmental biology · 2020
    Review
  17. Article
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  20. ZRANB2/SNHG20/FOXK1 Axis regulates Vasculogenic mimicry formation in glioma.Journal of experimental & clinical cancer research : CR · 2019
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Xingang LiDepartment of Orthopaedics, Heilongjiang General Hospital of Daqing Oil Field, Daqing, 163000, China.
Hongming LuDepartment of Pathology, Heilongjiang General Hospital of Daqing Oil Field, Daqing, 163000, China.
Guilian FanDepartment of Pathology, Heilongjiang General Hospital of Daqing Oil Field, Daqing, 163000, China.
Miao HeDepartment of Pathology, Heilongjiang General Hospital of Daqing Oil Field, Daqing, 163000, China.
Yu SunDepartment of Pathology, Heilongjiang General Hospital of Daqing Oil Field, Daqing, 163000, China.
Kai XuDepartment of Pathology, Heilongjiang General Hospital of Daqing Oil Field, Daqing, 163000, China.
Fengjun ShiDepartment of Orthopaedics, Heilongjiang General Hospital of Daqing Oil Field, Daqing, 163000, China. fengjun_shi_dq@163.com.ORCID http://orcid.org/0000-0002-1916-2945
Daqing Oilfield General Hospital · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

purposeOsteosarcoma (OS) is one of the most prevalent primary malignant bone tumors in adolescent. HOTAIR is highly expressed and associated with the epigenetic modifications, especially DNA methylation, in cancer. However, the regulation mechanism between HOTAIR and DNA methylation and the biological effects of them in the pathogenesis of osteosarcoma remains elusive.

methodThrough RNA-sequencing and computational analysis, followed by a variety of experimental validations, we report a novel interplay between HOTAIR, miR-126, and DNA methylation in OS.

resultsWe found that HOTAIR is highly expressed in OS cells and the knockdown of HOTAIR leads to the down-regulation of DNMT1, as well as the decrease of global DNA methylation level. RNA-sequencing analysis of HOTAIR-regulated gene shows that CDKN2A is significantly repressed by HOTAIR. A series of experiments show that HOTAIR represses the expression of CDKN2A through inhibiting the promoter activity of CDKN2A by DNA hypermethylation. Further evidence shows that HOTAIR activates the expression of DNMT1 through repressing miR-126, which is the negative regulator of DNMT1. Functionally, HOTAIR depletion increases the sensibility of OS cells to DNMT1 inhibitor through regulating the viability and apoptosis of OS cells via HOTAIR-miR126-DNMT1-CDKN2A axis.

conclusionThese results not only enrich our understanding of the regulation relationship between non-coding RNA, DNA methylation, and gene expression, however, also provide a novel direction in developing more sophisticated therapeutic strategies for OS patients.

Indexed as

DNA MethylationGene Expression Regulation, NeoplasticApoptosisBone NeoplasmsCell ProliferationCyclin-Dependent Kinase Inhibitor p16DNA (Cytosine-5-)-Methyltransferase 1DNA (Cytosine-5-)-MethyltransferasesEpigenesis, GeneticHumansMicroRNAsOsteosarcomaPromoter Regions, GeneticRNA, Long NoncodingTumor Cells, CulturedCyclin-Dependent Kinase Inhibitor p16DNA (Cytosine-5-)-Methyltransferase 1DNA (Cytosine-5-)-MethyltransferasesDNMT1 protein, humanHOTAIR long untranslated RNA, humanMicroRNAsMIRN126 microRNA, humanRNA, Long NoncodingCDKN2ADNA methylationHOTAIROsteosarcomaProliferation

Identifiers

PMID28730284
PMCPMC11819382
OpenAlexW2737341686

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.