ReviewFrontiers in plant science2017
Searching for an Accurate Marker-Based Prediction of an Individual Quantitative Trait in Molecular Plant Breeding.
Review in Frontiers in plant science, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.
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Who cites it
16 citing papers in PubMed.
- From research to application: evaluation of literature-based and newly identified GWAS and GP-derived loci for anthracnose resistance in white lupin, across validation panels and environments.Molecular breeding : new strategies in plant improvement · 2026Article
- Harnessing genomic prediction in Brassica napus through a nested association mapping population.The plant genome · 2025Article
- Elevated Mutation Burdens in Canadian Oat and Wheat Cultivars Released over the Past Century.Cells · 2025Article
- Effects of SNP marker density and training population size on prediction accuracy in alfalfa (Medicago sativa L.) genomic selection.The plant genome · 2024Article
- The Era of Plant Breeding: Conventional Breeding to Genomics-assisted Breeding for Crop Improvement.Current genomics · 2023Review
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- Chile Pepper (Frontiers in plant science · 2022Review
- The Genetic Basis of Tomato Aroma.Genes · 2021Review
- Functional Markers for Precision Plant Breeding.International journal of molecular sciences · 2020Review
- Evaluation of genomic selection methods for predicting fiber quality traits in Upland cotton.Molecular genetics and genomics : MGG · 2020Article
- A systems biology approach uncovers a gene co-expression network associated with cell wall degradability in maize.PloS one · 2019Article
- Advancing Bromegrass Breeding Through Imaging Phenotyping and Genomic Selection: A Review.Frontiers in plant science · 2019Review
- Identification of Genomic Regions Contributing to Protein Accumulation in Wheat under Well-Watered and Water Deficit Growth Conditions.Plants (Basel, Switzerland) · 2018Article
- Challenges and Strategies for Breeding Resistance inFrontiers in plant science · 2018Review
- Article
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Authors and funding
4 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Molecular plant breeding with the aid of molecular markers has played an important role in modern plant breeding over the last two decades. Many marker-based predictions for quantitative traits have been made to enhance parental selection, but the trait prediction accuracy remains generally low, even with the aid of dense, genome-wide SNP markers. To search for more accurate trait-specific prediction with informative SNP markers, we conducted a literature review on the prediction issues in molecular plant breeding and on the applicability of an RNA-Seq technique for developing function-associated specific trait (FAST) SNP markers. To understand whether and how FAST SNP markers could enhance trait prediction, we also performed a theoretical reasoning on the effectiveness of these markers in a trait-specific prediction, and verified the reasoning through computer simulation. To the end, the search yielded an alternative to regular genomic selection with FAST SNP markers that could be explored to achieve more accurate trait-specific prediction. Continuous search for better alternatives is encouraged to enhance marker-based predictions for an individual quantitative trait in molecular plant breeding.
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