Evidence map›Paper›PMID 28729641›Full record

ArticleScientific reports2017

The rhizosphere microbiome of burned holm-oak: potential role of the genus Arthrobacter in the recovery of burned soils.

Antonio J Fernández-González, Pilar Martínez-Hidalgo, José F Cobo-Díaz, Pablo J Villadas, Eustoquio Martínez-Molina, Nicolás Toro, Susannah G Tringe, Manuel Fernández-López

Abstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed.

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  10. Genomic, Molecular, and Phenotypic Characterization ofInternational journal of molecular sciences · 2023
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  11. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Antonio J Fernández-GonzálezDepartamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas, calle Profesor Albareda 1, 18008, Granada, Spain.
Pilar Martínez-HidalgoDepartamento de Microbiología y Genética, Lab. 209. Universidad de Salamanca, edificio Departamental de Biología, Campus M. Unamuno, Salamanca, Spain.
José F Cobo-DíazDepartamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas, calle Profesor Albareda 1, 18008, Granada, Spain.
Pablo J VilladasDepartamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas, calle Profesor Albareda 1, 18008, Granada, Spain.
Eustoquio Martínez-MolinaDepartamento de Microbiología y Genética, Lab. 209. Universidad de Salamanca, edificio Departamental de Biología, Campus M. Unamuno, Salamanca, Spain.
Nicolás ToroDepartamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas, calle Profesor Albareda 1, 18008, Granada, Spain.
Susannah G TringeDOE Joint Genome Institute, 2800 Mitchell Drive, Walnut Creek, CA, 94598, USA.
Manuel Fernández-LópezDepartamento de Microbiología del Suelo y Sistemas Simbióticos, Estación Experimental del Zaidín, Consejo Superior de Investigaciones Científicas, calle Profesor Albareda 1, 18008, Granada, Spain. manuel.fernandez@eez.csic.es.ORCID 0000-0003-2366-6908

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

After a forest wildfire, the microbial communities have a transient alteration in their composition. The role of the soil microbial community in the recovery of an ecosystem following such an event remains poorly understood. Thus, it is necessary to understand the plant-microbe interactions that occur in burned soils. By high-throughput sequencing, we identified the main bacterial taxa of burnt holm-oak rhizosphere, then we obtained an isolate collection of the most abundant genus and its growth promoting activities were characterised. 16S rRNA amplicon sequencing showed that the genus Arthrobacter comprised more than 21% of the total community. 55 Arthrobacter strains were isolated and characterized using RAPDs and sequencing of the almost complete 16S rRNA gene. Our results indicate that isolated Arthrobacter strains present a very high genetic diversity, and they could play an important ecological role in interaction with the host plant by enhancing aerial growth. Most of the selected strains exhibited a great ability to degrade organic polymers in vitro as well as possibly presenting a direct mechanism for plant growth promotion. All the above data suggests that Arthrobacter can be considered as an excellent PGP rhizobacterium that may play an important role in the recovery of burned holm-oak forests.

Indexed as

MicrobiotaQuercusRhizosphereSoil MicrobiologyWildfiresArthrobacterBiodiversityMetagenomeMetagenomicsPhylogenyPlant RootsRNA, Ribosomal, 16SSoilRNA, Ribosomal, 16SSoil

Identifiers

PMID28729641
PMCPMC5519729

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.