Evidence map›Paper›PMID 28727807›Full record

ArticlePLoS pathogens2017

Digoxin reveals a functional connection between HIV-1 integration preference and T-cell activation.

Alexander Zhyvoloup, Anat Melamed, Ian Anderson, Delphine Planas, Chen-Hsuin Lee, Janos Kriston-Vizi, Robin Ketteler, Andy Merritt, Jean-Pierre Routy, Petronela Ancuta and 2 more

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
1.3field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. The capsid revolution.Journal of molecular cell biology · 2024
    Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Th17 cell master transcription factor RORC2 regulates HIV-1 gene expression and viral outgrowth.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  11. Article
  12. Review
  13. Review
  14. Article
  15. Article
  16. HIV-1 uncoats in the nucleus near sites of integration.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  17. Cellular and molecular mechanisms of HIV-1 integration targeting.Cellular and molecular life sciences : CMLS · 2018
    Review
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 2 countries.

Alexander ZhyvoloupDivision of Infection & Immunity, University College London, London, United Kingdom.ORCID http://orcid.org/0000-0003-2450-8979
Anat MelamedDepartment of Medicine, Imperial College, St. Mary's Campus, London, United Kingdom.ORCID http://orcid.org/0000-0002-7312-3138
Ian AndersonDivision of Infection & Immunity, University College London, London, United Kingdom.ORCID http://orcid.org/0000-0002-3583-5919
Delphine PlanasDepartment of Microbiology, Infectiology and Immunology, Faculty of Medicine, University of Montreal and the Research Centre of the CHUM, Montreal, Québec, Canada.
Chen-Hsuin LeeDivision of Infection & Immunity, University College London, London, United Kingdom.ORCID http://orcid.org/0000-0001-7508-7604
Janos Kriston-ViziMRC Laboratory for Molecular Cell Biology, University College London, London, United Kingdom.ORCID http://orcid.org/0000-0002-0149-145X
Robin KettelerMRC Laboratory for Molecular Cell Biology, University College London, London, United Kingdom.ORCID http://orcid.org/0000-0002-2786-7291
Andy MerrittCentre for Therapeutics Discovery, MRC Technology, Mill Hill, London, United Kingdom.
Jean-Pierre RoutyMcGill University Health Centre, Glen site, Montreal, Québec, Canada.
Petronela AncutaDepartment of Microbiology, Infectiology and Immunology, Faculty of Medicine, University of Montreal and the Research Centre of the CHUM, Montreal, Québec, Canada.
Charles R M BanghamDepartment of Medicine, Imperial College, St. Mary's Campus, London, United Kingdom.
Ariberto FassatiDivision of Infection & Immunity, University College London, London, United Kingdom.ORCID http://orcid.org/0000-0003-1934-5327
University College London · GBMRC Laboratory for Molecular Cell Biology · GBUniversité de Montréal · CALifeArc · GBMcGill University Health Centre · CA

Funding

Medical Research Council MC_EX_G0800785Wellcome Trust
6 · The paper itself

Abstract

HIV-1 integrates more frequently into transcribed genes, however the biological significance of HIV-1 integration targeting has remained elusive. Using a selective high-throughput chemical screen, we discovered that the cardiac glycoside digoxin inhibits wild-type HIV-1 infection more potently than HIV-1 bearing a single point mutation (N74D) in the capsid protein. We confirmed that digoxin repressed viral gene expression by targeting the cellular Na+/K+ ATPase, but this did not explain its selectivity. Parallel RNAseq and integration mapping in infected cells demonstrated that digoxin inhibited expression of genes involved in T-cell activation and cell metabolism. Analysis of >400,000 unique integration sites showed that WT virus integrated more frequently than N74D mutant within or near genes susceptible to repression by digoxin and involved in T-cell activation and cell metabolism. Two main gene networks down-regulated by the drug were CD40L and CD38. Blocking CD40L by neutralizing antibodies selectively inhibited WT virus infection, phenocopying digoxin. Thus the selectivity of digoxin depends on a combination of integration targeting and repression of specific gene networks. The drug unmasked a functional connection between HIV-1 integration and T-cell activation. Our results suggest that HIV-1 evolved integration site selection to couple its early gene expression with the status of target CD4+ T-cells, which may affect latency and viral reactivation.

Indexed as

Anti-HIV AgentsCD4-Positive T-LymphocytesCells, CulturedDigoxinHIV-1HIV InfectionsHumansLymphocyte ActivationVirus IntegrationVirus LatencyAnti-HIV AgentsDigoxin

Identifiers

PMID28727807
PMCPMC5519191
OpenAlexW2737124251

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.