Evidence map›Paper›PMID 28726352›Full record

ArticleProtein science : a publication of the Protein Society2017

Computational design of a specific heavy chain/κ light chain interface for expressing fully IgG bispecific antibodies.

K J Froning, A Leaver-Fay, X Wu, S Phan, L Gao, F Huang, A Pustilnik, M Bacica, K Houlihan, Q Chai and 4 more

Open access · hybridAbstract read
In one paragraph

Article in Protein science : a publication of the Protein Society, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Addressing epistasis in the design of protein function.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Toward Drug-Like Multispecific Antibodies by Design.International journal of molecular sciences · 2020
    Review
  12. Article
  13. Review
  14. Review
  15. Advances in protein structure prediction and design.Nature reviews. Molecular cell biology · 2019
    Review
  16. Article
  17. Engineering IgG-Like Bispecific Antibodies-An Overview.Antibodies (Basel, Switzerland) · 2018
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 3 institutions in 1 country.

K J FroningEli Lilly Biotechnology Center, 10300 Campus Point Drive, San Diego, California, 92121.
A Leaver-FayDepartment of Biochemistry and Biophysics, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina.
X WuEli Lilly Biotechnology Center, 10300 Campus Point Drive, San Diego, California, 92121.
S PhanEli Lilly Biotechnology Center, 10300 Campus Point Drive, San Diego, California, 92121.
L GaoEli Lilly Biotechnology Center, 10300 Campus Point Drive, San Diego, California, 92121.
F HuangEli Lilly Biotechnology Center, 10300 Campus Point Drive, San Diego, California, 92121.
A PustilnikEli Lilly Biotechnology Center, 10300 Campus Point Drive, San Diego, California, 92121.
M BacicaEli Lilly Biotechnology Center, 10300 Campus Point Drive, San Diego, California, 92121.
K HoulihanDepartment of Biochemistry and Biophysics, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina.
Q ChaiEli Lilly Biotechnology Center, 10300 Campus Point Drive, San Diego, California, 92121.
J R FitchettEli Lilly Biotechnology Center, 10300 Campus Point Drive, San Diego, California, 92121.
J HendleEli Lilly Biotechnology Center, 10300 Campus Point Drive, San Diego, California, 92121.
B KuhlmanDepartment of Biochemistry and Biophysics, University of North Carolina at Chapel Hill, Chapel Hill, North Carolina.
S J DemarestEli Lilly Biotechnology Center, 10300 Campus Point Drive, San Diego, California, 92121.
Center Point · USEli Lilly (United States) · USUniversity of North Carolina at Chapel Hill · US

Funding

MOLECULAR AND CELLULAR BIOPHYSICS TRAINING PROGRAMT32GM008570 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI KUHLMAN, BRIAN A, SLEP, KEVIN C · 1995 to 2022
$5.1M
Designing Affinity and Specificity at Protein InterfacesR01GM073960 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI KUHLMAN, BRIAN A · 2005 to 2018
$3.1M
NIGMS NIH HHS R01 GM073960NIGMS NIH HHS T32 GM008570
6 · The paper itself

Abstract

The use of bispecific antibodies (BsAbs) to treat human diseases is on the rise. Increasingly complex and powerful therapeutic mechanisms made possible by BsAbs are spurring innovation of novel BsAb formats and methods for their production. The long-lived in vivo pharmacokinetics, optimal biophysical properties and potential effector functions of natural IgG monoclonal (and monospecific) antibodies has resulted in a push to generate fully IgG BsAb formats with the same quaternary structure as monoclonal IgGs. The production of fully IgG BsAbs is challenging because of the highly heterogeneous pairing of heavy chains (HCs) and light chains (LCs) when produced in mammalian cells with two IgG HCs and two LCs. A solution to the HC heterodimerization aspect of IgG BsAb production was first discovered two decades ago; however, addressing the LC mispairing issue has remained intractable until recently. Here, we use computational and rational engineering to develop novel designs to the HC/LC pairing issue, and particularly for κ LCs. Crystal structures of these designs highlight the interactions that provide HC/LC specificity. We produce and characterize multiple fully IgG BsAbs using these novel designs. We demonstrate the importance of specificity engineering in both the variable and constant domains to achieve robust HC/LC specificity within all the BsAbs. These solutions facilitate the production of fully IgG BsAbs for clinical use.

Indexed as

AnimalsAntibodies, BispecificCHO CellsComputational BiologyCricetinaeCricetulusHEK293 CellsHumansImmunoglobulin Heavy ChainsImmunoglobulin kappa-ChainsModels, MolecularProtein EngineeringRecombinant Fusion ProteinsSoftwareAntibodies, BispecificImmunoglobulin Heavy ChainsImmunoglobulin kappa-ChainsRecombinant Fusion Proteinsbispecific antibodycomputational designmultivalent antibodyprotein-protein interface design

Identifiers

PMID28726352
PMCPMC5606552
OpenAlexW2738516022

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.