Evidence map›Paper›PMID 28724958›Full record

ArticleScientific reports2017

Viral driven epigenetic events alter the expression of cancer-related genes in Epstein-Barr-virus naturally infected Burkitt lymphoma cell lines.

Hector Hernandez-Vargas, Henri Gruffat, Marie Pierre Cros, Audrey Diederichs, Cécilia Sirand, Romina C Vargas-Ayala, Antonin Jay, Geoffroy Durand, Florence Le Calvez-Kelm, Zdenko Herceg and 4 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
2.0field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed, 33 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Observational
  6. Subtyping Burkitt Lymphoma by DNA Methylation.Genes, chromosomes & cancer · 2025
    Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Hypermethylation ofEXCLI journal · 2022
    Article
  13. Review
  14. Review
  15. Article
  16. Burkitt Lymphomas Evolve to Escape Dependencies on Epstein-Barr Virus.Frontiers in cellular and infection microbiology · 2020
    Review
  17. Environmental Influencers, MicroRNA, and Multiple Sclerosis.Journal of central nervous system disease · 2020
    Review
  18. Article
  19. Lymphomas of the head and neck region: an update.Virchows Archiv : an international journal of pathology · 2019
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 2 institutions in 1 country.

Hector Hernandez-VargasInternational Agency for Research on Cancer, World Health Organization, Lyon, 69372, France.
Henri GruffatCIRI, (Oncogenic Herpesviruses Team), Lyon, France.
Marie Pierre CrosInternational Agency for Research on Cancer, World Health Organization, Lyon, 69372, France.
Audrey DiederichsInternational Agency for Research on Cancer, World Health Organization, Lyon, 69372, France.
Cécilia SirandInternational Agency for Research on Cancer, World Health Organization, Lyon, 69372, France.
Romina C Vargas-AyalaInternational Agency for Research on Cancer, World Health Organization, Lyon, 69372, France.
Antonin JayInternational Agency for Research on Cancer, World Health Organization, Lyon, 69372, France.
Geoffroy DurandInternational Agency for Research on Cancer, World Health Organization, Lyon, 69372, France.
Florence Le Calvez-KelmInternational Agency for Research on Cancer, World Health Organization, Lyon, 69372, France.
Zdenko HercegInternational Agency for Research on Cancer, World Health Organization, Lyon, 69372, France.
Evelyne ManetCIRI, (Oncogenic Herpesviruses Team), Lyon, France.
Christopher P WildInternational Agency for Research on Cancer, World Health Organization, Lyon, 69372, France.
Massimo TommasinoInternational Agency for Research on Cancer, World Health Organization, Lyon, 69372, France.
Rosita AccardiInternational Agency for Research on Cancer, World Health Organization, Lyon, 69372, France. accardi@iarc.fr.
Centre international de recherche sur le cancer · FRÉcole Normale Supérieure de Lyon · FR

Funding

World Health Organization 001
6 · The paper itself

Abstract

Epstein-Barr virus (EBV) was identified as the first human virus to be associated with a human malignancy, Burkitt's lymphoma (BL), a pediatric cancer endemic in sub-Saharan Africa. The exact mechanism of how EBV contributes to the process of lymphomagenesis is not fully understood. Recent studies have highlighted a genetic difference between endemic (EBV+) and sporadic (EBV-) BL, with the endemic variant showing a lower somatic mutation load, which suggests the involvement of an alternative virally-driven process of transformation in the pathogenesis of endemic BL. We tested the hypothesis that a global change in DNA methylation may be induced by infection with EBV, possibly thereby accounting for the lower mutation load observed in endemic BL. Our comparative analysis of the methylation profiles of a panel of BL derived cell lines, naturally infected or not with EBV, revealed that the presence of the virus is associated with a specific pattern of DNA methylation resulting in altered expression of cellular genes with a known or potential role in lymphomagenesis. These included ID3, a gene often found to be mutated in sporadic BL. In summary this study provides evidence that EBV may contribute to the pathogenesis of BL through an epigenetic mechanism.

Indexed as

Epigenesis, GeneticGene Expression Regulation, NeoplasticBurkitt LymphomaCell Line, TumorCpG IslandsDNA MethylationDown-RegulationGene SilencingHerpesvirus 4, HumanHumansInhibitor of Differentiation ProteinsMutationNeoplasm ProteinsRNA, MessengerViral Matrix ProteinsEBV-associated membrane antigen, Epstein-Barr virusID3 protein, humanInhibitor of Differentiation ProteinsNeoplasm ProteinsRNA, MessengerViral Matrix Proteins

Identifiers

PMID28724958
PMCPMC5517637
OpenAlexW2734976255

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.