Evidence map›Paper›PMID 28724489›Full record

ArticleJournal of the American Association for Laboratory Animal Science : JAALAS2017

Population Genetic Structure of the Cayo Santiago Colony of Rhesus Macaques (

Sreetharan Kanthaswamy, Robert F Oldt, Jillian Ng, Angelina V Ruiz-Lambides, Elizabeth Maldonado, Melween I Martínez, Carlos A Sariol

Abstract read
In one paragraph

Article in Journal of the American Association for Laboratory Animal Science : JAALAS, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
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  6. Pedigree Data from Six Rhesus Macaque (Journal of the American Association for Laboratory Animal Science : JAALAS · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Sreetharan KanthaswamyCalifornia National Primate Research Center, University of California, Davis, California, School of Mathematics and Natural Sciences, Arizona State University (ASU) at the West Campus, Glendale, Arizona, Evolutionary Biology Graduate Program, School of Life Sciences, Arizona State University, Tempe, Arizona;, Email: sree.kanthaswamy@asu.edu.
Robert F OldtSchool of Mathematics and Natural Sciences, Arizona State University (ASU) at the West Campus, Glendale, Arizona, Evolutionary Biology Graduate Program, School of Life Sciences, Arizona State University, Tempe, Arizona.
Jillian NgCalifornia National Primate Research Center, University of California, Davis, California.
Angelina V Ruiz-LambidesCaribbean Primate Research Center and Departments of Microbiology and Medical Zoology and Internal Medicine, University of Puerto Rico-Medical Sciences Campus, San Juan, Puerto Rico.
Elizabeth MaldonadoCaribbean Primate Research Center and Departments of Microbiology and Medical Zoology and Internal Medicine, University of Puerto Rico-Medical Sciences Campus, San Juan, Puerto Rico.
Melween I MartínezCaribbean Primate Research Center and Departments of Microbiology and Medical Zoology and Internal Medicine, University of Puerto Rico-Medical Sciences Campus, San Juan, Puerto Rico.
Carlos A SariolCaribbean Primate Research Center and Departments of Microbiology and Medical Zoology and Internal Medicine, Departments of Microbiology and Medical Zoology and Internal Medicine, University of Puerto Rico-Medical Sciences Campus, San Juan, Puerto Rico.

Funding

Translational Science InitiativeP40OD012217 · OD · UNIVERSITY OF PUERTO RICO MED SCIENCES · PI CARLOS A SARIOL · 2012 to 2026
$40.4M
NIH HHS P40 OD012217
6 · The paper itself

Abstract

The rhesus macaque population at Cayo Santiago increases annually and is in urgent need of control. In-depth assessments of the colony's population genetic and pedigree structures provide a starting point for improving the colony's long-term management program. We evaluated the degree of genetic variation and coefficients of inbreeding and kinship of the Cayo Santiago colony by using pedigree and short tandem repeat (STR) data from 4738 rhesus macaques, which represent 7 extant social groups and a group of migrant males. Information on each animal's parentage, sex, birth date, and date of death or removal from the island were used to generate estimates of mean kinship, kinship value, gene value, genome uniqueness (GU), founder equivalents (fe), and founder genome equivalents (fg). Pedigree and STR analyses revealed that the social groups have not differentiated genetically from each other due to male-mediated gene flow (that is, FST estimates were in the negative range) and exhibit sufficient genetic variation, with mean estimates of allele numbers and observed and expected heterozygosity of 6.57, 0.72, and 0.70, respectively. Estimates of GU, fe, and fg show that a high effective number of founders has affected the colony's current genetic structure in a positive manner. As demographic changes occur, genetic and pedigree matrices need to be monitored consistently to ensure the health and wellbeing of the Cayo Santiago colony.

Indexed as

Animal Population GroupsAnimalsAnimals, WildFemaleGenetics, PopulationGenetic VariationIslandsMacaca mulattaMaleMicrosatellite RepeatsPedigreePuerto Rico

Identifiers

PMID28724489
PMCPMC5517329

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.