Evidence map›Paper›PMID 28724402›Full record

ArticleParasites & vectors2017

A dual colour fluorescence in situ hybridization (FISH) assay for identifying the zoonotic malaria parasite Plasmodium knowlesi with a potential application for the specific diagnosis of knowlesi malaria in peripheral-level laboratories of Southeast Asia.

Jyotsna Shah, Akhila Poruri, Olivia Mark, Urmila Khadilka, Franziska Mohring, Robert W Moon, Ranjan Ramasamy

Open access · goldAbstract read
In one paragraph

Article in Parasites & vectors, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed, 1 pooled it
1.2field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 1 synthesis or guideline pooled it, 12 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Article
  5. Diagnostic Methods for Non-Falciparum Malaria.Frontiers in cellular and infection microbiology · 2021
    Review
  6. Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 3 countries.

Jyotsna ShahID-FISH Technology, Palo Alto, CA, USA. jyotsna@aol.com.
Akhila PoruriID-FISH Technology, Palo Alto, CA, USA.
Olivia MarkID-FISH Technology, Palo Alto, CA, USA.
Urmila KhadilkaKasturba Medical College Hospital, Mangalore, India.
Franziska MohringLondon School of Hygiene and Tropical Medicine, Keppel Street, London, UK.
Robert W MoonLondon School of Hygiene and Tropical Medicine, Keppel Street, London, UK.
Ranjan RamasamyID-FISH Technology, Palo Alto, CA, USA. rjr200911@yahoo.com.ORCID http://orcid.org/0000-0003-0246-7053
FX Palo Alto Laboratory · USUniversity of London · GBID-FISH Technology (United States) · USKasturba Medical College Hospital · INPalo Alto Research Center · US

Funding

CatheterScope for Intraluminal Image of Early.NeoplasiaR33CA094303 · NCI · UNIVERSITY OF WASHINGTON · PI SEIBEL, ERIC J · 2004 to 2006
$1.7M
CatheterScope for Intraluminal Image of Early.NeoplasiaR21CA094303 · NCI · UNIVERSITY OF WASHINGTON · PI SEIBEL, ERIC J · 2003 to 2003
$151k
Medical Research Council MR/M021157/1NCI NIH HHS R21 CA094303NCI NIH HHS R33 CA094303
6 · The paper itself

Abstract

backgroundPlasmodium knowlesi is primarily responsible for zoonotic malaria in several Southeast Asian countries. Precise identification of the parasite in the blood of patients presently relies on an expensive and elaborate PCR procedure because microscopic examination of blood and other available field identification techniques lack adequate specificity. Therefore, the use of a simple and inexpensive dual-colour fluorescence in situ hybridization (FISH) assay, analogous to FISH assays recently described for Plasmodium falciparum and Plasmodium vivax, was investigated as a potential tool for identifying P. knowlesi.

resultsA P. knowlesi 18S rDNA sequence-based DNA probe was used to test thin blood smears of P. knowlesi by FISH, and fluorescence viewed in a light microscope fitted with a light emitting diode light source and appropriate emission and barrier filters. The limit of detection in the P. knowlesi FISH assay was 84 parasites per μl in infected monkey blood and 61 parasites per μl for P. knowlesi cultured in human blood. The P. knowlesi-specific FISH probe detected only P. knowlesi and not P. falciparum, Plasmodium malariae, Plasmodium ovale, P. vivax or a panel of other human blood-borne pathogens. A previously described Plasmodium genus-specific probe used simultaneously in the P. knowlesi FISH assay reacted with all tested Plasmodium species.

conclusionsTo our knowledge, this is the first description of a FISH assay for P. knowlesi that is potentially useful for diagnosing infections in remote laboratories in endemic countries.

Indexed as

Asia, SoutheasternDNA, ProtozoanDNA, RibosomalHumansIn Situ Hybridization, FluorescenceMalariaMolecular Diagnostic TechniquesOligonucleotide ProbesParasitemiaPlasmodium knowlesiRNA, Ribosomal, 18SSequence Analysis, DNADNA, ProtozoanDNA, RibosomalOligonucleotide ProbesRNA, Ribosomal, 18SDNA probeFluorescence in situ hybridizationMalaria diagnosisPlasmodium knowlesiZoonotic malaria

Identifiers

PMID28724402
PMCPMC5517825
OpenAlexW2736712834

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.