Evidence map›Paper›PMID 28723573›Full record

ArticleCell reports2017

Proteomic and Metabolomic Characterization of a Mammalian Cellular Transition from Quiescence to Proliferation.

Ho-Joon Lee, Mark P Jedrychowski, Arunachalam Vinayagam, Ning Wu, Ng Shyh-Chang, Yanhui Hu, Chua Min-Wen, Jodene K Moore, John M Asara, Costas A Lyssiotis and 4 more

Open access · goldAbstract read
In one paragraph

Article in Cell reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 52 citations in OpenAlex.

  1. Article
  2. Article
  3. A workflow for quantifying cell quiescence in 3D spheroids.Biochemistry and biophysics reports · 2026
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Structural biases in disordered proteins are prevalent in the cell.Nature structural & molecular biology · 2024
    Article
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  13. Review
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  15. Article
  16. Article
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  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors at 7 institutions in 2 countries.

Ho-Joon LeeDepartment of Systems Biology, Harvard Medical School, Boston, MA 02115, USA.
Mark P JedrychowskiDepartment of Cell Biology, Harvard Medical School, Boston, MA 02115, USA.
Arunachalam VinayagamDepartment of Genetics, Harvard Medical School, Boston, MA 02115, USA.
Ning WuCenter for Cancer and Cell Biology, Van Andel Research Institute, Grand Rapids, MI 49503, USA.
Ng Shyh-ChangStem Cell & Regenerative Biology, Genome Institute of Singapore, S138672 Singapore, Singapore.
Yanhui HuDepartment of Genetics, Harvard Medical School, Boston, MA 02115, USA.
Chua Min-WenStem Cell & Regenerative Biology, Genome Institute of Singapore, S138672 Singapore, Singapore.
Jodene K MooreDepartment of Systems Biology, Harvard Medical School, Boston, MA 02115, USA.
John M AsaraDivision of Signal Transduction, Department of Medicine, Beth Israel Deaconess Medical Center and Harvard Medical School, Boston, MA 02115, USA.
Costas A LyssiotisDivision of Gastroenterology, Department of Molecular and Integrative Physiology and Department of Internal Medicine, University of Michigan Medical School, Ann Arbor, MI 48109, USA.
Norbert PerrimonDepartment of Genetics, Harvard Medical School, Boston, MA 02115, USA.
Steven P GygiDepartment of Cell Biology, Harvard Medical School, Boston, MA 02115, USA.
Lewis C CantleyMeyer Cancer Center, Department of Medicine, Weill Cornell Medical College, New York, NY 10065, USA.
Marc W KirschnerDepartment of Systems Biology, Harvard Medical School, Boston, MA 02115, USA. Electronic address: marc@hms.harvard.edu.
Harvard University · USGenome Institute of Singapore · SGBeth Israel Deaconess Medical Center · USCenter for Systems Biology · USCornell University · USUniversity of Michigan–Ann Arbor · USVan Andel Institute · US

Funding

BIOCHEMICAL STUDIES OF MITOSISR01GM026875 · NIGMS · UNIVERSITY OF CALIFORNIA SAN FRANCISCO · PI KIRSCHNER, MARC WALLACE · 1985 to 2019
$18.2M
New Sample Multiplexing Technologies to Identify Chemical Probes and Illuminate Ubiquitin BiologyR01GM067945 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI GYGI, STEVEN P · 2003 to 2024
$10.5M
The Role of PI3K in Growth RegulationR01GM041890 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI CANTLEY, LEWIS C. · 1990 to 2016
$4.1M
PHOSPHATDYLINOSITOL-3-P AND GROWTH REGULATIONR37GM041890 · NIGMS · BETH ISRAEL DEACONESS MEDICAL CENTER · PI CANTLEY, LEWIS C. · 1999 to 2008
$3.8M
NIGMS NIH HHS R01 GM026875NIGMS NIH HHS R01 GM041890NIGMS NIH HHS R01 GM067945NIGMS NIH HHS R37 GM041890
6 · The paper itself

Abstract

There exist similarities and differences in metabolism and physiology between normal proliferative cells and tumor cells. Once a cell enters the cell cycle, metabolic machinery is engaged to facilitate various processes. The kinetics and regulation of these metabolic changes have not been properly evaluated. To correlate the orchestration of these processes with the cell cycle, we analyzed the transition from quiescence to proliferation of a non-malignant murine pro-B lymphocyte cell line in response to IL-3. Using multiplex mass-spectrometry-based proteomics, we show that the transition to proliferation shares features generally attributed to cancer cells: upregulation of glycolysis, lipid metabolism, amino-acid synthesis, and nucleotide synthesis and downregulation of oxidative phosphorylation and the urea cycle. Furthermore, metabolomic profiling of this transition reveals similarities to cancer-related metabolic pathways. In particular, we find that methionine is consumed at a higher rate than that of other essential amino acids, with a potential link to maintenance of the epigenome.

Indexed as

AnimalsB-LymphocytesCell ProliferationGlycolysisHumansLipid MetabolismMetabolomicsMiceUp-RegulationB cellscancer metabolismcell cyclecell growthIL-3metabolomicsmethionineprotein complexesquiescenceTMT proteomics

Identifiers

PMID28723573
PMCPMC5626450
OpenAlexW2737327904

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.