Evidence map›Paper›PMID 28721632›Full record

ArticleVirologica Sinica2017

Detection and characterization of three zoonotic viruses in wild rodents and shrews from Shenzhen city, China.

Bo Wang, Chun-Lin Cai, Bei Li, Wei Zhang, Yan Zhu, Wei-Hong Chen, Fei Zhuo, Zheng-Li Shi, Xing-Lou Yang

Open access · bronzeAbstract read
In one paragraph

Article in Virologica Sinica, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed, 1 pooled it
2.1field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 1 synthesis or guideline pooled it, 49 citations in OpenAlex.

  1. Pooled it
  2. Review
  3. Review
  4. Article
  5. Article
  6. Article
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  17. Review
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  19. Molecular Prevalence, Genetic Diversity, and Tissue Tropism ofAnimals : an open access journal from MDPI · 2024
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Bo WangCAS Key Laboratory of Special Pathogens, Wuhan Institute of Virology, Chinese Academy of Science, Wuhan, 430071, China.
Chun-Lin CaiLuohu Center for Disease Control and Prevention, Shenzhen, 518020, China.
Bei LiCAS Key Laboratory of Special Pathogens, Wuhan Institute of Virology, Chinese Academy of Science, Wuhan, 430071, China.
Wei ZhangCAS Key Laboratory of Special Pathogens, Wuhan Institute of Virology, Chinese Academy of Science, Wuhan, 430071, China.
Yan ZhuCAS Key Laboratory of Special Pathogens, Wuhan Institute of Virology, Chinese Academy of Science, Wuhan, 430071, China.
Wei-Hong ChenLuohu Center for Disease Control and Prevention, Shenzhen, 518020, China.
Fei ZhuoLuohu Center for Disease Control and Prevention, Shenzhen, 518020, China.
Zheng-Li ShiCAS Key Laboratory of Special Pathogens, Wuhan Institute of Virology, Chinese Academy of Science, Wuhan, 430071, China.
Xing-Lou YangCAS Key Laboratory of Special Pathogens, Wuhan Institute of Virology, Chinese Academy of Science, Wuhan, 430071, China. yangxl@wh.iov.cn.ORCID http://orcid.org/0000-0002-5317-8983
Wuhan Institute of Virology · CNShenzhen Center for Disease Control and Prevention · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Diverse species of rodents and shrews, which are abundant worldwide, harbor a variety of viruses; some of these are closely related to human viruses and possess zoonotic potential. Previously studies have demonstrated that the mammarenavirus and hantavirus carried by rodents or shrews could cause diseases in human population. To determine the distribution of zoonotic viruses in Shenzhen city, the major city in southern China with a high population density, we analyzed 225 rodents (Rattus norvegicus and Rattus flavipectus) and 196 shrews (Suncus murinus) from urban and rural districts for the presence of mammarenavirus, hantavirus, and hepatitis E virus (HEV) by RT-PCR targeting the conserved regions. The infection rates for mammarenavirus, hantaviruses, and HEV in rodents and shrews were 3.56%, 6.89%, and 1.66%, respectively. Partial genome fragment analysis indicated that mammarenavirus and hantavirus strains had more than 90% and 99% nucleic acid identity with Cardamones virus and Seoul virus, respectively, which cause diseases in humans. Although the present HEV strains identified are typically found worldwide, phylogenetic analysis demonstrated a divergence of 16%. To our knowledge, the present work is the first report of the prevalence of mammarenavirus, hantaviruses, and rat HEV strains in rodents and shrews from Shenzhen city, China. Our findings highlight the zoonotic potential of rodent- and shrew-borne mammarenavirus and hantavirus, and the biodiversity of rat HEV isolates in Shenzhen city. The present work suggests that utilization of good hygiene habits is important to minimize the risk of zoonosis.

Indexed as

AnimalsArenaviridaeChinaHepatitis EOrthohantavirusRatsReverse Transcriptase Polymerase Chain ReactionShrewsZoonoseshantavirushepatitis E virus (HEV)mammarenavirusShenzhen city

Identifiers

PMID28721632
PMCPMC6598888
OpenAlexW2737461227

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.