ArticleScientific reports2017
Complete chloroplast genome sequences of Lilium: insights into evolutionary dynamics and phylogenetic analyses.
Article in Scientific reports, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 92 papers.
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92 citing papers in PubMed.
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- The giant genome of lily provides insights into the hybridization of cultivated lilies.Nature communications · 2025Article
- The complete chloroplast genomes and phylogenetic analysis ofMitochondrial DNA. Part B, Resources · 2025Article
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- The chloroplast genome of Cephalanthera nanchuanica (Orchidaceae): comparative and phylogenetic analysis with other Neottieae species.BMC genomics · 2024Article
- Comparative Analysis of Plastome Sequences of SevenInternational journal of molecular sciences · 2024Article
- Sequence characteristics, genetic diversity and phylogenetic analysis of the Cucurbita ficifolia (Cucurbitaceae) chloroplasts genome.BMC genomics · 2024Article
- Comparative and phylogenetic analysis of the complete chloroplast genomes of ten Pittosporum species from East Asia.Functional & integrative genomics · 2024Article
- Historical biogeography and evolutionary diversification ofPlant diversity · 2024Article
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- The complete chloroplast genome ofMitochondrial DNA. Part B, Resources · 2024Article
32 more citing papers are in PubMed but not listed here.
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7 authors.
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Abstract
Lilium is a large genus that includes approximately 110 species distributed throughout cold and temperate regions of the Northern Hemisphere. The species-level phylogeny of Lilium remains unclear; previous studies have found universal markers but insufficient phylogenetic signals. In this study, we present the use of complete chloroplast genomes to explore the phylogeny of this genus. We sequenced nine Lilium chloroplast genomes and retrieved seven published chloroplast genomes for comparative and phylogenetic analyses. The genomes ranged from 151,655 bp to 153,235 bp in length and had a typical quadripartite structure with a conserved genome arrangement and moderate divergence. A comparison of sixteen Lilium chloroplast genomes revealed ten mutation hotspots. Single nucleotide polymorphisms (SNPs) for any two Lilium chloroplast genomes ranged from 8 to 1,178 and provided robust data for phylogeny. Except for some of the shortest internodes, phylogenetic relationships of the Lilium species inferred from the chloroplast genome obtained high support, indicating that chloroplast genome data will be useful to help resolve the deeper branches of phylogeny.
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