Evidence map›Paper›PMID 28720494›Full record

ArticleBiochemical and biophysical research communications2017

The eukaryotic enzyme Bds1 is an alkyl but not an aryl sulfohydrolase.

Grace L Waddell, Caroline R Gilmer, Nicholas G Taylor, John Randolf S Reveral, Marcello Forconi, Jennifer L Fox

Abstract read
In one paragraph

Article in Biochemical and biophysical research communications, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.2field-weighted citation impact, top 50% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Assimilation of alternative sulfur sources in fungi.World journal of microbiology & biotechnology · 2018
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Grace L WaddellDepartment of Chemistry and Biochemistry, College of Charleston, 66 George St., Charleston, SC, USA 29424.
Caroline R GilmerDepartment of Chemistry and Biochemistry, College of Charleston, 66 George St., Charleston, SC, USA 29424.
Nicholas G TaylorDepartment of Chemistry and Biochemistry, College of Charleston, 66 George St., Charleston, SC, USA 29424.
John Randolf S ReveralDepartment of Chemistry and Biochemistry, College of Charleston, 66 George St., Charleston, SC, USA 29424.
Marcello ForconiDepartment of Chemistry and Biochemistry, College of Charleston, 66 George St., Charleston, SC, USA 29424. Electronic address: forconim@cofc.edu.
Jennifer L FoxDepartment of Chemistry and Biochemistry, College of Charleston, 66 George St., Charleston, SC, USA 29424. Electronic address: foxjl@cofc.edu.
College of Charleston · US

Funding

South Carolina IDeA Networks of Biomedical Research (SC INBRE V)P20GM103499 · NIGMS · UNIVERSITY OF SOUTH CAROLINA AT COLUMBIA · PI EDIE C GOLDSMITH · 2012 to 2026
$61.0M
Supplement for South Carolina BRIN - 1P20 RR16461P20RR016461 · NCRR · UNIVERSITY OF SOUTH CAROLINA AT COLUMBIA · PI DEAVOR, JAMES · 2001 to 2011
$32.3M
Howard Hughes Medical InstituteNCRR NIH HHS P20 RR016461NIGMS NIH HHS P20 GM103499
6 · The paper itself

Abstract

The eukaryotic enzyme Bds1 in Saccharomyces cerevisiae is a metallo-β-lactamase-related enzyme evolutionarily originating from bacterial horizontal gene transfer that serves an unknown biological role. Previously, Bds1 was reported to be an alkyl and aryl sulfatase. However, we demonstrate here that Bds1 acts on primary alkyl sulfates (of 6-12 carbon atoms) but not the aryl sulfates p-nitrophenyl sulfate and p-nitrocatechol sulfate. The apparent catalytic rate constant for hydrolysis of the substrate 1-hexyl sulfate by Bds1 is over 100 times lower than that of the reaction catalyzed by its bacterial homolog SdsA1. We show that Bds1 shares a catalytic mechanism with SdsA1 in which the carbon atom of the sulfate ester is the subject of nucleophilic attack, rather than the sulfur atom, resulting in C-O bond lysis. In contrast to SdsA1 and another bacterial homolog with selectivity for secondary alkyl sulfates named Pisa1, Bds1 does not show any substantial activity towards secondary alkyl sulfates. Neither Bds1 nor SdsA1 have any significant activity towards a branched primary alkyl sulfate, primary and secondary steroid sulfates, or phosphate diesters. Therefore, the enzymes homologous to SdsA1 that have been identified and characterized thus far vary in their selectivity towards primary and secondary alkyl sulfates but do not exhibit aryl sulfatase activity.

Indexed as

Amino Acid Sequencebeta-LactamasesBiocatalysisCloning, MolecularEscherichia coliGene ExpressionGene Transfer, HorizontalKineticsRecombinant ProteinsSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsSequence AlignmentSequence Homology, Amino AcidSubstrate SpecificitySulfatasesSulfuric Acid Estersalkylsulfatasebeta-LactamasesRecombinant ProteinsSaccharomyces cerevisiae ProteinsSulfatasesSulfuric Acid Esterssulfuric acid monohexyl esterAlkyl sulfateAryl sulfateLiquid chromatography-mass spectrometrySulfataseSulfohydrolase

Identifiers

PMID28720494
PMCPMC5585873
OpenAlexW2734729760

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.