Evidence map›Paper›PMID 28720156›Full record

ReviewExpert reviews in molecular medicine2017

FMR1 CGG repeat expansion mutation detection and linked haplotype analysis for reliable and accurate preimplantation genetic diagnosis of fragile X syndrome.

Indhu-Shree Rajan-Babu, Mulias Lian, Felicia S H Cheah, Min Chen, Arnold S C Tan, Ethiraj B Prasath, Seong Feei Loh, Samuel S Chong

Abstract readReview
In one paragraph

Review in Expert reviews in molecular medicine, 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Non-coding RNAs in Nervous System Development and Disease.Frontiers in cell and developmental biology · 2020
    Review
  11. Article
  12. Article
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Indhu-Shree Rajan-BabuDepartment of Pediatrics,Yong Loo Lin School of Medicine, National University of Singapore,Singapore 119074,Singapore.
Mulias LianPreimplantation Genetic Diagnosis Centre, Khoo Teck Puat - National University Children's Medical Institute, National University Health System,Singapore 119228,Singapore.
Felicia S H CheahPreimplantation Genetic Diagnosis Centre, Khoo Teck Puat - National University Children's Medical Institute, National University Health System,Singapore 119228,Singapore.
Min ChenDepartment of Pediatrics,Yong Loo Lin School of Medicine, National University of Singapore,Singapore 119074,Singapore.
Arnold S C TanDepartment of Pediatrics,Yong Loo Lin School of Medicine, National University of Singapore,Singapore 119074,Singapore.
Ethiraj B PrasathThomson Fertility Centre, Thomson Medical Centre,Singapore 307470,Singapore.
Seong Feei LohThomson Fertility Centre, Thomson Medical Centre,Singapore 307470,Singapore.
Samuel S ChongDepartment of Pediatrics,Yong Loo Lin School of Medicine, National University of Singapore,Singapore 119074,Singapore.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fragile X mental retardation 1 (FMR1) full-mutation expansion causes fragile X syndrome. Trans-generational fragile X syndrome transmission can be avoided by preimplantation genetic diagnosis (PGD). We describe a robust PGD strategy that can be applied to virtually any couple at risk of transmitting fragile X syndrome. This novel strategy utilises whole-genome amplification, followed by triplet-primed polymerase chain reaction (TP-PCR) for robust detection of expanded FMR1 alleles, in parallel with linked multi-marker haplotype analysis of 13 highly polymorphic microsatellite markers located within 1 Mb of the FMR1 CGG repeat, and the AMELX/Y dimorphism for gender identification. The assay was optimised and validated on single lymphoblasts isolated from fragile X reference cell lines, and applied to a simulated PGD case and a clinical in vitro fertilisation (IVF)-PGD case. In the simulated PGD case, definitive diagnosis of the expected results was achieved for all 'embryos'. In the clinical IVF-PGD case, delivery of a healthy baby girl was achieved after transfer of an expansion-negative blastocyst. FMR1 TP-PCR reliably detects presence of expansion mutations and obviates reliance on informative normal alleles for determining expansion status in female embryos. Together with multi-marker haplotyping and gender determination, misdiagnosis and diagnostic ambiguity due to allele dropout is minimised, and couple-specific assay customisation can be avoided.

Indexed as

HaplotypesMutationTrinucleotide RepeatsAllelesFemaleFertilization in VitroFragile X Messenger Ribonucleoprotein 1Fragile X SyndromeGenetic TestingHumansMalePedigreePolymerase Chain ReactionPregnancyPreimplantation DiagnosisReproducibility of ResultsFMR1 protein, humanFragile X Messenger Ribonucleoprotein 1

Identifiers

PMID28720156
PMCPMC5733830

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.